Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1889 |
Symbol | |
ID | 5357355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1926713 |
End bp | 1927525 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640810942 |
Product | putative glycine betaine-binding protein precursor |
Protein accession | YP_001347270 |
Protein GI | 152988307 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCGG CGGTGGGGAT GGCGGCCGCG GCGGACAAGC CGGTGATCAC CATCGGTTAC GTGGACGGCT GGTCGGACAG CGTGGCGACC ACCCATGTGG CCGCCGAGGT GATCCGCGAG AAGCTCGGCT ACGAGGTGAA GCTGATGCCG GTGGCGGCGG GGATCATGTG GCAGGGAGTG GCGCGCGGCA AGCTCGACGC CATGCTCTCG GCCTGGCTGC CGGGCACCCA CGGCGCCTAC TACGAGAAGA TGAAGGACAA GGTGGTCAAC CTGGCCATCA ACTACCCGGA CGCACGCATC GGCCTGATCG TCCCGGAATA CGTGAATGCC GGCAGCATCG CCGACCTCCA GGCGCAGAAG GACGCTTTCG GCGGCCGCGT GGTGGGCATC GACGCCGGCG CCGGGGTGAT GATCAAGACC GACGAGGCGA TCAAGCAATA CGGCCTCGAC TACAAGCTGG TGGCCAGTTC CGGCAGCGGC ATGATCGCCG AGCTGACCCG TGCCGAGAAC GAGAAGAAGC CGGTGGTGGT GACCGGTTGG ATCCCGCACT GGATGTTCGC CAAGTGGAAA CTGAAATTCC TCGATGATCC GAAGAAGGTC TACGGTGACA CCGAGCACGT CGACACCGTC GCCAACCCGG CGCTCGAGGC CAAGGCCAGG CCGGTCTGGG AGTTCCTGAA GAAGTTCGGC TGGAAGGACG GCAACGAGGT CGGCCGGGTG ATGCTGGCGA TCCAGGAGGG CGCCAAGCCC GAGGATGCGG CGAAGCAGTG GGTGGCGGCC AATCCGCAAC GGGTCGGGGA GTGGCTGCCG TAG
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Protein sequence | MSAAVGMAAA ADKPVITIGY VDGWSDSVAT THVAAEVIRE KLGYEVKLMP VAAGIMWQGV ARGKLDAMLS AWLPGTHGAY YEKMKDKVVN LAINYPDARI GLIVPEYVNA GSIADLQAQK DAFGGRVVGI DAGAGVMIKT DEAIKQYGLD YKLVASSGSG MIAELTRAEN EKKPVVVTGW IPHWMFAKWK LKFLDDPKKV YGDTEHVDTV ANPALEAKAR PVWEFLKKFG WKDGNEVGRV MLAIQEGAKP EDAAKQWVAA NPQRVGEWLP
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