Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1855 |
Symbol | capB |
ID | 5356978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1897252 |
End bp | 1897461 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640810908 |
Product | cold acclimation protein B |
Protein accession | YP_001347238 |
Protein GI | 152985784 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0386681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGAATC GTCAGAACGG CACCGTAAAA TGGTTCAACG ACGCCAAAGG CTTCGGCTTC ATCACCCCGG AAAGCGGTAA CGACCTGTTC GTTCACTTCC GTTCCATCCA GGGCACCGGC TTCAAGAGCC TGCAGGAAGG CCAGAAGGTT TCCTTCGTGG TCGTCAACGG CCAGAAAGGC CTGCAAGCCG ACGAAGTACA AGTCATCTGA
|
Protein sequence | MSNRQNGTVK WFNDAKGFGF ITPESGNDLF VHFRSIQGTG FKSLQEGQKV SFVVVNGQKG LQADEVQVI
|
| |