| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1841 |
|---|
| Symbol | oprO |
|---|
| ID | 5357963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1876826 |
|---|
| End bp | 1878142 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640810894 |
|---|
| Product | outer membrane porin OprO precursor |
|---|
| Protein accession | YP_001347224 |
|---|
| Protein GI | 152984813 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3746] Phosphate-selective porin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTA AGCACTCGCT CGGCTTCGTT GCCAGCGCTC TGGCTCTGGC CGTATCTGCC
CAGGCGTTCG CCGGCACCGT GACCACCGAC GGCGCCGATA TCGTGATCAA GACCAAGGGC
GGCCTCGAAG TCGCCACCAC CGACAAGGAA TTCAGCTTCA AGCTGGGCGG CCGCCTGCAG
GCCGACTACA GCCGCTTCGA CGGCTTCTAT ACCAAGAACG GCAATACCGC CGACGCGGCC
TACTTCCGTC GCGCCTTCAT CGAAATCGGC GGCACCGCGT ACAAGGACTG GAAATACCAG
GTCAACTTCG ACCTGTCGCA CAACACCGGC AGCTCCGACA ACGGTTACTT CGACGAAGCC
TCGGTCACCT ATACCGGCTT CAACCCGGTC AACCTGAAGT TCGGTCGTTT CGACCCCGAC
TTCGGCCTGG AAAAGGCCAC CAGCTCCAAG TGGGTGACCG CGCCCGAGCG TAATGCCGCC
TACGAACTGG CCGACTGGAT CAACACCCAC CAGGACGGCA TGGGTGCCCA GGTCAACTCG
ACCCTCGCCG ACATGGCCTA CCTGTCCGCC GGCGTGTCCG CCAAGGATGC CGACGACCGC
GACGGCGACA GCGTCAAGCA GTTCAACTTC CGCGGCGTAT TCGCGCCGAT GCACGAAACC
GGCAATGTCC TCCACGTCGG TGTGAACTAT GCCTACCGCG ACCTCGACGA CACCGCCTTC
GATTCGCGCA TCCGTCCGCG CCTGGGCATG CGCGGCATCG CCACCAGCGG CGGCAACGAC
GCCGGCGACA ACGGCAACCG CGCGACTTTC GGCGGCGTCT CCAACTCGCC GGCCGGCTCC
TACAAGGACG ACAGCGTCTG GGGCCTGGAA GGCGCCTGGG CGATGGGCCC GTTCTCGGCC
CAGGCCGAGT ACCTGGCGCG CAAGCTGAAG GCCGACGACA ACGGCTACAA GGACATCAAG
GCCAAGGGCT ACTACGCGCA ACTGGCCTAC ACCCTCACCG GCGAGTCCCG CCAGTACAAG
CTGGAAGGTG CCAAGTTCGA CTCCATCAAG CCGGAAAACA AGGAAATCGG CGCCTGGGAA
CTGTTCTACC GCTACGACAA CATCAAGGTG GAAGACGACA ACGTGGTCGC CGACACCGCC
ACCCGCGAAG TCGGCGACAC CAAGGCCAAG GCGCACAACC TGGGCGTGAA CTGGTACGTC
AACGACGCGG TGAAGATCAG CGCCGCCTAC GTCAAGGCGA AGACCGACAA GATCACCAAC
GCCAATGGCG ACGATGATGG TGACGGCTTC GTGACCCGCC TGCAGTACGT GTTCTAA
|
|---|
| Protein sequence | MIRKHSLGFV ASALALAVSA QAFAGTVTTD GADIVIKTKG GLEVATTDKE FSFKLGGRLQ
ADYSRFDGFY TKNGNTADAA YFRRAFIEIG GTAYKDWKYQ VNFDLSHNTG SSDNGYFDEA
SVTYTGFNPV NLKFGRFDPD FGLEKATSSK WVTAPERNAA YELADWINTH QDGMGAQVNS
TLADMAYLSA GVSAKDADDR DGDSVKQFNF RGVFAPMHET GNVLHVGVNY AYRDLDDTAF
DSRIRPRLGM RGIATSGGND AGDNGNRATF GGVSNSPAGS YKDDSVWGLE GAWAMGPFSA
QAEYLARKLK ADDNGYKDIK AKGYYAQLAY TLTGESRQYK LEGAKFDSIK PENKEIGAWE
LFYRYDNIKV EDDNVVADTA TREVGDTKAK AHNLGVNWYV NDAVKISAAY VKAKTDKITN
ANGDDDGDGF VTRLQYVF
|
|---|
| |