| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1808 |
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| Symbol | |
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| ID | 5356322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1843716 |
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| End bp | 1845896 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640810861 |
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| Product | hypothetical protein |
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| Protein accession | YP_001347191 |
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| Protein GI | 152984602 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.882104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGC AAGGCCTGCG CTTCATCGGA GAGTCTCCCG TCGATGGCTA TGTCCTGCAG
AACTGCACCT ATGCTCCCTC GCTGGTGGCG CTGGCCTTCC TGGTCGCCTG CCTGGCCGGC
TACACCGCGC TGGACATGGT CGAACGGGTC GGCAACAGCC TGCGCCACCC ACGCCGCTGG
CAATGGATCG GGGCGTTCTG CCTGGGCAGC GGCATCTGGG CCACGCATTT CGTCGCCATG
CTGGCGTTCC ACGCACCGGT CGCCCTGCGC TACGACCTGC CGGTCACCGG CCTGTCGCTG
CTGATCGCCA TCGCCGCCTC CTACCTGGCG ATGTACATGA CCGCCCGCCC GCGCTTCGGC
CTGCTGCCCT GCCTGCTCGC CGCCTGCTGC ATCGGCCTGG GGATCGCCGC CATGCACTAC
ACCGGGATGG CGGCGATGCG CTCGGTGGCC ACCCAGTACT ACCAGCCATC GCTGTTCACC
CTTTCGGTGC TGATCGCCAT CGGCGCCGCC TTCACCGCCC TCGCCGCGGT CCCCTACCTG
CGCGGCCGGC GCAGCGCGCG CTACCGCTAC ATGAAGCTGG TCGCCAGCCT GCTGCTGGCC
GGCGCCATCG CCGCCATGCA TTTCACCGGG ATGGCCGCGC TGGTGCTCAG CGTACCCGCC
GGCACGCCAC TGGAACTGCA GGCCAGCGCC GACTCGCTGC GTCTGGGCTG GCTCACCGGA
CTGCTCGCCA GCGCCATCGC CGCCTGCGGC ATCTCGGCCG CTTGGTCGGA GAAACAGCGG
GAACGCCAGC TCAGCGAAAA CAGCCGGGTC AACGCCCTGC TCAACCAGCT CGACCACGCC
CACGCCTCGC TGCGCCAGCT GGCCCGCTAT GACGCCCTGA CCGGCCTGCA GAACCGCACG
GCCTTCAACG AAGTGTTCGC CCAGCACCTG CAGAACTGCC AGCTGCGGGG CAAAGGCCTG
GCAGTGATGT TCCTCGACCT GGATCACTTC AAGCGGATCA ACGATTCGCT CGGCCACGAC
TCCGGCGACG AACTGCTGAA GATCGTCTCC GAACGCATCC GTAGCGTGCT GCGCGATACC
GATGTGGTGG CGCGCTTCGC CGGCGACGAG TTCTGCGTGC TCGCCGACCT CGCCCAGGAC
CATGAGGCGC ACATTCTCTC GCAGCGCCTG CTGCAGAAGA TGAAGGAGCC GATCGCCCTC
GACGGCCGCA CCCTGGTGAT GACCGCCAGC ATCGGCGTCA GCCTCTACCC CAACGATGGC
GAACAGTGCG AGGAACTGCT GAAGAACGCC GGACTCGCCC TGCATCAGTC CAAGTCCTGC
GGGCGCAACA ATGCACAGTT CTTCAGCCGC CAATTGCTGC TGCGGGCGAC CCAGGAACTG
CAGATGGAGG AAGAACTGCG CCAGGCCCTG TGCGACGACC AGCTGGAGCT GCATTACCAG
CCGATCCTCG CCCTCGCCGA CGGCGAGGTG CACCAGCTGG AAGCCCTGGT GCGCTGGCGC
CACCCGAGCC AGGGGCTGCT CGGCCCGGAC CGCTTCATCG GCCTGGCCGA AGCCAACGGC
ATGATCGACC AGCTCGACGA CTGGGTCCTG CGGCGCGCCT GCCGCGACCT GCGTGGCCTG
CACCTGGCGG GCCATGCGCG GCTGCGCGTG GCGGTCAACT GCTGCGCCAG CAACCTCGGC
CGCGCCAGCC TGGTCGATGA AGTCCGCCAT GCCCTTGAGC AGGCCGATCT GGCCGCGCAT
TTCCTCGAGC TGGAGGTGAC CGAGGACGCG CTGATGTACA ACATCGACCA GACCATCCCG
CTGCTGGAGC GCCTGCGCGA ATTGGGCGTC AGCCTGTCGA TCGACGACTT CGGCACCGGC
TATTCGTCGC TCGCCTACCT GCGCCGCCTG CCGCTGGACG CGCTGAAGGT CGACCGCTCG
TTCATCATGG ACATCCCCGC CTCGCAGCGC GACATGGAGA TCGCCCAGGC GATCATCGCG
ATGGCCCAGA AACTGCACCT GAAGGTCGTC GCCGAAGGCG TGGAAACCCC ACAGCAGCTG
GCGTTCCTGC GGGAAAACCA TTGCGAGCTG GTGCAGGGCT ACCTGTTCAG CCGGCCGCTG
CCGCTGGCCG CGCTGGAGGA ATTCCTCCGC GCCTACCGGC TCGACACCAC CCCGCCGCTG
TGCAGCCTGG ACCAGGCCTG A
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| Protein sequence | MDWQGLRFIG ESPVDGYVLQ NCTYAPSLVA LAFLVACLAG YTALDMVERV GNSLRHPRRW
QWIGAFCLGS GIWATHFVAM LAFHAPVALR YDLPVTGLSL LIAIAASYLA MYMTARPRFG
LLPCLLAACC IGLGIAAMHY TGMAAMRSVA TQYYQPSLFT LSVLIAIGAA FTALAAVPYL
RGRRSARYRY MKLVASLLLA GAIAAMHFTG MAALVLSVPA GTPLELQASA DSLRLGWLTG
LLASAIAACG ISAAWSEKQR ERQLSENSRV NALLNQLDHA HASLRQLARY DALTGLQNRT
AFNEVFAQHL QNCQLRGKGL AVMFLDLDHF KRINDSLGHD SGDELLKIVS ERIRSVLRDT
DVVARFAGDE FCVLADLAQD HEAHILSQRL LQKMKEPIAL DGRTLVMTAS IGVSLYPNDG
EQCEELLKNA GLALHQSKSC GRNNAQFFSR QLLLRATQEL QMEEELRQAL CDDQLELHYQ
PILALADGEV HQLEALVRWR HPSQGLLGPD RFIGLAEANG MIDQLDDWVL RRACRDLRGL
HLAGHARLRV AVNCCASNLG RASLVDEVRH ALEQADLAAH FLELEVTEDA LMYNIDQTIP
LLERLRELGV SLSIDDFGTG YSSLAYLRRL PLDALKVDRS FIMDIPASQR DMEIAQAIIA
MAQKLHLKVV AEGVETPQQL AFLRENHCEL VQGYLFSRPL PLAALEEFLR AYRLDTTPPL
CSLDQA
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