| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1796 |
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| Symbol | |
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| ID | 5359837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1831003 |
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| End bp | 1832775 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640810849 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001347179 |
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| Protein GI | 152989678 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.425571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGC TCCTCGCCCT TCCCGACCTG CAGCCGGAAC GCCTGTTCGT GCAATCCGGC
GACGTACGCC TGGCGGTCTA CTGTTGGGGC GCGGCGGACA AGCCGACCCT GCTGCTGGTG
CACGGCTATC CGGACAACCA CGAGACCTGG TTGCCGCTGA TCCGCCAACT GGCCGGGCGC
TACCGGATCG TCGCCTACGA CGTGCGCGGC GCCGGCGCCT CGGACAAGCC ACGCTGGAGC
CGCGACTATC ACCTGAGGCT GCTCAGCGAG GACCTGCAGG CGGTGATCCG CGCCACCAGC
CCGGAGCGCC CGGTGCATCT GGTAGCGCAT GACTGGGGCT CGATCCAGAC CTGGGAAAGC
GTCACCGATC CGCAGTGCCG CGCGCTGATC GCCTCCTACA CCTCGATCTC CGGGCCCTGC
CTGGATCACG TCGGCTTCTG GATGCGCGAA CATCTCAGGC AGCGCAGCCC GAAGGCCCTG
AAACAGGTGG CCAGCCAGTT GCTCCATTCC TGGTACATCG CCTTCTTCCA CACCCCCATC
GTCCCGGAGC TGCTCTGGAG CATGGGCCTG GCCCGGCTCT GGCCGCAGTT CCTGAAGCGC
GCCGAGGGCG TGCGCCATCC GCCGGTCAAC CCGACCCAGG CCAGCGACGG CCGGCACGGC
GTCAAGCTGT ACCGCGGCAA CTTCATCCGC TGCCTGTTCC GTCCGCGCAA GCGCCACACC
GAGGTGCCGG TGCAACTGAT CGTGCCGACC CGCGATCGCT ACGTCGGCGC CCAACTGTTC
CAGCATCTGA GCCTGTGGGC GCCGCGCCTG TGGCGGCGCG AGGCGAGCGT CGGCCATTGG
CAACTGCTGG CCGAACCGGA GCAACTGGCC GGCTGGCTCG GCGAGTTCAT CGACGCCCAG
GAAACCGGCG CGCCCACGCC CGCCCTGCAA CGCGCCCAGG TCAGGCCCGA CGCGCGCTCG
ATGAGTGGCA AGCTGGTGGT GGTCACCGGC GCCGGCGGCG GCATCGGCCG TTCGACCCTG
CTCAGCTTCG CCGAGCGCGG CGCCAGCCTG CTCGCCGCCG ACCTCGACCT GGAAGCCGCC
GAACGCAGCG CCGAACTGGC CCGCGCGCTG GGCGCCACGG CCCATGCCTA CCAGGTCGAC
GTCGGCGACA CCCAGGCCAT GGAGATCTTC GCCGAGTGGG TCCGCGGCAA TCTCGGAGTC
CCGGATGTGG TGGTCAGCAA TGCCGGCATC GGCATGGCCG GGCCGATGCT CGACACCTCG
CCGGCTGAAT GGGAGCGCCT GCTGCGGGTC AACCTGTGGA GCGTGATCGA CGGCTGCCGC
CTGTTCGGCC GGCAGATGGT CGCGGCGAAC AAGCCGGGGC ACCTGGTCAA CGTCGCCTCC
GGGGTGGCCT TCGCGCCGTC GCGCAACTAT CCGGCCTATG CCACCAGCAA GGCCGCGGTG
CTGATGCTCA GCGAATGCCT GCGGGCGGAA CTGGCCGGAC GCTCGATCGG GGTCACAGCG
GTGTGTCCGG GCTTCGTCGA CACCGGTATC GTCCAGGCCA CCCGCTTAGC CGGAATGGAT
GCTGAGCGCC AGGCGCGGCG CCAGGCCAAG ATCCAGCGTT TCTACAAGCG TCGCCGGCTG
AGCCCGGACA CCGTCGGGGA AAAGCTGGTG CGTGCCGTGG AGCGCAACAA GGCGGTGGTC
TCGGTGGGCA GCGAGGTCCA TCTCGGCGCC CTGCAATGGC GCTTCGCGCC CTGGGCCACG
CGGCTTCTCG CGCGTTTCGA CCTGACGTCC TGA
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| Protein sequence | MNALLALPDL QPERLFVQSG DVRLAVYCWG AADKPTLLLV HGYPDNHETW LPLIRQLAGR
YRIVAYDVRG AGASDKPRWS RDYHLRLLSE DLQAVIRATS PERPVHLVAH DWGSIQTWES
VTDPQCRALI ASYTSISGPC LDHVGFWMRE HLRQRSPKAL KQVASQLLHS WYIAFFHTPI
VPELLWSMGL ARLWPQFLKR AEGVRHPPVN PTQASDGRHG VKLYRGNFIR CLFRPRKRHT
EVPVQLIVPT RDRYVGAQLF QHLSLWAPRL WRREASVGHW QLLAEPEQLA GWLGEFIDAQ
ETGAPTPALQ RAQVRPDARS MSGKLVVVTG AGGGIGRSTL LSFAERGASL LAADLDLEAA
ERSAELARAL GATAHAYQVD VGDTQAMEIF AEWVRGNLGV PDVVVSNAGI GMAGPMLDTS
PAEWERLLRV NLWSVIDGCR LFGRQMVAAN KPGHLVNVAS GVAFAPSRNY PAYATSKAAV
LMLSECLRAE LAGRSIGVTA VCPGFVDTGI VQATRLAGMD AERQARRQAK IQRFYKRRRL
SPDTVGEKLV RAVERNKAVV SVGSEVHLGA LQWRFAPWAT RLLARFDLTS
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