| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1723 |
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| Symbol | hasD |
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| ID | 5355317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1762076 |
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| End bp | 1763863 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640810776 |
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| Product | transport protein HasD |
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| Protein accession | YP_001347107 |
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| Protein GI | 152986442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCC GGCCGGCCTC GCCGCGCAAT GAAATCCTCG CCACCCTCGG CCGCTTCCGC
CCGGCGCTGC GCAGCGTCGC GCTGTTCACC GCGGTGATCA ACCTGCTGAT GCTGGCGCCC
TCGCTGTACA TGCTGCAGGT CTACGACCGG GTGCTTGGCT CCGGCAACGA GATGACCCTG
CTGATGCTGA CCCTCATGGT GCTCGGCCTC TATCTGCTGC TCGGCGCCCT GGAGTGGGTG
CGCAGCCTGG TGGTGATCCG CCTCGGCGGC CAGCTCGACA TGCAACTCAA CCAGCGTATC
TACGACGCTT CCTTCCGCGC CAGCCTGGAG CGCGGCGAAC AGGCCGCCGG GCAGGCGCTG
AACGACCTGA CCAACCTGCG CCAGTTCCTC ACCGGCAATG CCCTGTTCGC CTTCTTCGAC
GCGCCCTGGT TCCCGCTCTA CCTGCTGGTG ATCTTCCTCT TCAGCCCCTG GCTCGGCCTG
CTCGCCCTGG CCGGGGCGCT GTCGCTGGTG CTGCTCGCCT GGATCAACGA AAGCCGCTCG
CGCGAACCGC TGGCCGAGGC CGGGCAACTG TCGATCCTCG CCACCCAGCA GGCCGCGGCC
AACCTGCGCC AGGCGGAAAC CCTGGCGGCA CTGGGCATGT TGCCGGCCAT GCGCGCGCGC
TGGTTCGCCC AGCACCAGGC CTTCCTTGCC CGGCAGAACC TCGGCAGCGA GCGCAGCGCG
GCGATCGGCG CGACCTCCAA GGGCGTGCGC CTGGCCTTGC AGTCGCTGGT GCTCGGTCTC
GGCGCCTGGC TGGCGGTGGA AGGCCTGATC ACCCCGGGGA TGATGATCGC CGGCTCGATC
CTGATGGGGC GCGTGCTCAG CCCCATCGAC CAGCTGATCG CCGTCTGGCG CCAATGGAGC
GGCGCGCGCC AGGCCTACGA GCGTCTGGCG CGGCTGCTCG AAGAGAATCC GCCGGCCGCC
GCGGGCATGC CGCTGCCGGC GCCGCGCGGC GCGTTGCGCG TCGAACGGCT CTGCGCGGCC
GCGCCGGGAC GCGAGCAGGC ACTGCTGCAG GACCTCGATT TCACCCTGGA ACCCGGCGAA
GCGCTTGGCG TGATCGGTCC GTCCGGTTCC GGCAAGTCGA CCCTGGCGCG CCTGCTGGTG
GGCGCCTGGC AGCCGTTGTC CGGCGCGGTG CGCCTGGACG GCGCCGACCT GCGGCAGTGG
AGCGCGGCGG CGCTGGGGCC GCACATCGGC TACCTGGCCC AGGACGTGCA GCTGTTCGCC
GGCAGCATCG CCGAGAACAT CGCGCGCTTC GCCGAGGTGG ACGCCGAGAA GGTGGTGGCG
GCGGCGCGCC TGGCCGGCGT GCACGATCTG GTGCTGCGCC TGCCGCAGGG CTACGACACG
CGCCTGGGCG ACGGCGGCGC CGGTCTCTCC GGCGGCCAGC GCCAGCGCAT CGGCCTGGCC
CGCGCGCTGT ACGGGCGGCC GGCGCTGATC GTGCTCGACG AACCCAACGC CAGCCTCGAC
GAGGCGGGGG AGGCGGCCCT GGCCGAGGCC ATCGTGGCGA TGCGCCGACA GGGCAGCAGT
CTGGTGCTGG TGACCCACAA GCCGGCGGTG CTGGCGCTGA CCGACAAGCT GTTGCTGCTG
CACGCCGGGC GTCTGCAGCG CTTCGGCGCG ACGGCCGAGG TGCTCGCCAG CGCCTCGCCG
CCGTCGGCCG CTGCGGCACC GGCACGGCCG ACGCCGGCGT TCGGTTTCGG CTACCGGCCG
GGACCGGGCA TGCCGGTCGG CGGTGTGCCG GGAGGAGCGA CGCGATGA
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| Protein sequence | MKLRPASPRN EILATLGRFR PALRSVALFT AVINLLMLAP SLYMLQVYDR VLGSGNEMTL
LMLTLMVLGL YLLLGALEWV RSLVVIRLGG QLDMQLNQRI YDASFRASLE RGEQAAGQAL
NDLTNLRQFL TGNALFAFFD APWFPLYLLV IFLFSPWLGL LALAGALSLV LLAWINESRS
REPLAEAGQL SILATQQAAA NLRQAETLAA LGMLPAMRAR WFAQHQAFLA RQNLGSERSA
AIGATSKGVR LALQSLVLGL GAWLAVEGLI TPGMMIAGSI LMGRVLSPID QLIAVWRQWS
GARQAYERLA RLLEENPPAA AGMPLPAPRG ALRVERLCAA APGREQALLQ DLDFTLEPGE
ALGVIGPSGS GKSTLARLLV GAWQPLSGAV RLDGADLRQW SAAALGPHIG YLAQDVQLFA
GSIAENIARF AEVDAEKVVA AARLAGVHDL VLRLPQGYDT RLGDGGAGLS GGQRQRIGLA
RALYGRPALI VLDEPNASLD EAGEAALAEA IVAMRRQGSS LVLVTHKPAV LALTDKLLLL
HAGRLQRFGA TAEVLASASP PSAAAAPARP TPAFGFGYRP GPGMPVGGVP GGATR
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