Gene PSPA7_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_1717 
Symbol 
ID5354593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp1756697 
End bp1757212 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content68% 
IMG OID640810770 
ProductECF subfamily RNA polymerase sigma-70 factor 
Protein accessionYP_001347101 
Protein GI152987053 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGCGC CGTTGGCGGA GCAGGATCTC AAGGCACTGT TTCTCAGGCA TGCCCGGAAG 
TTGCAGGCGT ATCTGTTGCG CAAGACCCGC GATCCGCACC TGGCCGCGGA CCTCGCGCAG
GAGAGCTTCC TGCGCCTGGC CGAGCAGCGG CACAAGGAGC CGATCGAGCA TGTCGATGCC
TACCTCTACC GCACCGCGCA CAACCTCGCC ATCGACCATT ACCGGCAGGA ACGGCGGCGC
CGCACCGAGA CCCGGCCGGG CGACGACTTC GCCGGGTTCG TCGCCGACCA GCCCGGCCCC
GAGGAGTCCG CGGTGGATGC CGATGCGCTT GCCCGCCTGC GCGAGACAGT CGCCGAACTG
CCGCCGCGCA CCCGTGAGAT CTTTCGACTC AACCGCCTGG AAGGGCTGAC CCATGCCGAG
GTGGCGAGGC GCCTGGAAAT CTCCGATAGC TCGGTGCAGA AGCACCTGGC CCGCGCCCTG
GCCCATGTGA TGCAGGCACT CGAGGATTCC CGCTGA
 
Protein sequence
MDAPLAEQDL KALFLRHARK LQAYLLRKTR DPHLAADLAQ ESFLRLAEQR HKEPIEHVDA 
YLYRTAHNLA IDHYRQERRR RTETRPGDDF AGFVADQPGP EESAVDADAL ARLRETVAEL
PPRTREIFRL NRLEGLTHAE VARRLEISDS SVQKHLARAL AHVMQALEDS R