Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1717 |
Symbol | |
ID | 5354593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1756697 |
End bp | 1757212 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640810770 |
Product | ECF subfamily RNA polymerase sigma-70 factor |
Protein accession | YP_001347101 |
Protein GI | 152987053 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATGCGC CGTTGGCGGA GCAGGATCTC AAGGCACTGT TTCTCAGGCA TGCCCGGAAG TTGCAGGCGT ATCTGTTGCG CAAGACCCGC GATCCGCACC TGGCCGCGGA CCTCGCGCAG GAGAGCTTCC TGCGCCTGGC CGAGCAGCGG CACAAGGAGC CGATCGAGCA TGTCGATGCC TACCTCTACC GCACCGCGCA CAACCTCGCC ATCGACCATT ACCGGCAGGA ACGGCGGCGC CGCACCGAGA CCCGGCCGGG CGACGACTTC GCCGGGTTCG TCGCCGACCA GCCCGGCCCC GAGGAGTCCG CGGTGGATGC CGATGCGCTT GCCCGCCTGC GCGAGACAGT CGCCGAACTG CCGCCGCGCA CCCGTGAGAT CTTTCGACTC AACCGCCTGG AAGGGCTGAC CCATGCCGAG GTGGCGAGGC GCCTGGAAAT CTCCGATAGC TCGGTGCAGA AGCACCTGGC CCGCGCCCTG GCCCATGTGA TGCAGGCACT CGAGGATTCC CGCTGA
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Protein sequence | MDAPLAEQDL KALFLRHARK LQAYLLRKTR DPHLAADLAQ ESFLRLAEQR HKEPIEHVDA YLYRTAHNLA IDHYRQERRR RTETRPGDDF AGFVADQPGP EESAVDADAL ARLRETVAEL PPRTREIFRL NRLEGLTHAE VARRLEISDS SVQKHLARAL AHVMQALEDS R
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