| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1463 |
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| Symbol | |
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| ID | 5359559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1481574 |
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| End bp | 1484651 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640810516 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001346847 |
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| Protein GI | 152987812 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTCA ATCTTTCCGC CTGGGCTTTG CAGAACCGCC AGATCGTCCT GTACCTGATG
ATCCTGCTCG GCGCGGTCGG CGCGCTGTCC TACAGCAAGC TGGGGCAGAG CGAAGACCCG
CCGTTCACCT TCAAGGCCAT GGTGGTGCAG ACCAACTGGC CGGGCGCCAG CGCCGAGGAG
GTGGCGCGGC AGGTCACCGA GCGCATCGAA AAGAAGCTGA TGGAAACCGG CGACTACGAT
CGCATCGTGT CCTTCTCACG CCCCGGCGTC TCGCAGGTGA CCTTCATGGC CCGCGAGGAC
ATCCATTCCA GCGAGATCCC CGAGCTCTGG TACCAGATCC GCAAGAAGAT CGGCGACATT
CGCGCCACCT TGCCGCAGAG CATCCAGGGC CCGTTCTTCA ACGACGAGTT CGGCACCACC
TACGGCAACA TCTATGCGCT CACCGGCAAG GGCTTCGACT ACGCGGTGAT GAAGGACTAC
GCCGACCGCC TGCAACTGCA ATTGCAGCGG ATCAGGAACG TCGGCAAGGT CGAGCTGATC
GGCCTGCAGG ACGAGAAGAT CTGGATCGAC CTGTCCAACA CCAAGCTGGC CACCCTCGGC
CTGCCCCTGG CGGCGGTGCA GAAGGCGCTG GAGGAGCAGA ATGCGGTGGC CTCCTCGGGG
TTCTTCGAAA CCGCCAGCGA CCGCGTGCAG TTGCGCGTTT CCGGGCGTTT CGATTCGGTG
GAGGAGATCC GCGACTTCCC CATCCGCGTC GGCGACCGCA CCTTCCGCAT CGGCGACGTG
GCCGAGGTGC GCCGCGGCTT CAACGATCCG CCGGCGCCGC GCATGCGCTT CATGGGCGAG
GACGCCATCG GCCTGGCGGT GTCGATGAAG CCGGGCGGCG ACATCCTGGT GCTGGGCAAG
GCCCTGGAAG CCGAGTTCGC CCGCCTGCAG CAGTCGCTGC CGGCCGGACT GGAACTGCGC
AAGGTATCCG ACCAGCCGGC GGCGGTGCGC ACCGGGGTCG GCGAATTCAT CCGGGTGCTG
GCCGAGGCGC TGGTGATCGT CCTGCTGGTG AGCTTCTTCT CCCTCGGCCT GCGCACCGGC
CTGGTGGTGG CGCTGTCGAT CCCGCTGGTG CTGGCGATGA CCTTCGCCGC CATGCATTAC
TTCGGCATCG GCCTGCACAA GATCTCCCTC GGCGCCCTGG TTCTGGCGCT GGGGTTGCTG
GTGGACGACG CGATCATCGC GGTGGAGATG ATGGCGGTGA AGATGGAGCA GGGCTACGAC
CGTCTCAAGG CGGCCAGCTT CGCCTGGACC AGCACAGCCT TCCCGATGCT CACCGGCACC
CTGATCACCG CCGCCGGCTT CCTGCCGATC GCCACCGCGC AGTCCGGTAC CGGCGAATAC
ACCCGCTCGC TGTTCCAGGT GGTGACCATC GCGCTGGTGG TCTCCTGGTT CGCCGCAGTG
GTCTTCGTTC CCTACCTGGG GGCCAAGCTG CTGCCGGACC TGGCCAGGCT GCATGCGCAG
AAGCACGGCG GCAGCGCCGA CGGCTACGAT CCCTACGCAA CGGCCTTCTA CCAGCGCTTC
CGGCGCCTGG TGGAATGGTG CGTACGCTAC CGCAAGACGG TGATCGTCCT GACCCTCGCC
GCTTTCGTCG GCGCGTTGCT GCTGTTCCGT CTGGTGCCGC AGCAGTTCTT CCCGCCCTCG
GCGCGCCTGG AACTGCTGCT GGACATCAAG CTGGCCGAGG GCGCCTCGCT GCGTGCCACC
ACCGAGGAAG TGCAGCGCCT GGAAAAGATG CTGCAAGGCC ATGACGGCAT CGACAACTAC
GTGGCCTATG TCGGCACCGG TTCGCCGCGC TTCTACCTGC CGCTGGATCA GCAATTGCCG
GCGGCCAGCT TCGCCCAGGT GGTGGTGCTG GCCAAGGACC TGGAGAGCCG CGAGACGCTG
CGCAAGTGGC TGATCGAGCG GATGAACGAG GACTTCCCGC ACCTGCGCAG CCGCATCAGT
CGCCTGGAGA ACGGCCCTCC GGTGGGCTAT CCGGTGCAGT TCCGGGTTTC CGGCGAGGAT
ATTCCGCAGG TCCGCGAACT GGCGCGCAAG GTCGCCGACA GGATGCGCGA GAACCCGCAC
GTGGTGAACG TGCACCTGGA TTGGGAAGAG CCGAGCAAGG TGGTCTACCT GAGCATCGAC
CAGGAGCGCG CCCGCGCCCT GGGAGTGAGC ACCGCCAGCC TGTCGCAGTT CCTGCAGAGC
GCGCTGACCG GTTCGCACGT CAGCTTCTAC CGCGAGGACA ACGAACTGAT CGAGATCCTC
CTGCGCGGCA CCGAGCGCGA GCGCCGCGAC CTGTCGCTGC TGCCGAGCCT GGCGGTGCCG
ACCGGGAATG GCCGCAGCGT GGCGCTGTCG CAGATCGCCA CGCTCGAATA CGGCTTCGAA
GAGGGCATCA TCTGGCACCG CAACCGCCTG CCGACGGTCA CGGTACGCGC CGACATCTAC
GACGATTCGC TGCCGGCGAC CCTGGTCGCG CAGATCGCCC CGACCCTGGA GCCGATCCGC
GCCGAGCTAC CGGACGGCTA CCTGCTGGAG GTGGGCGGTA CGGTGGAGGA CGCGGCGAAG
GGCCAGAGTT CGGTGAACGC CGGCGTGCCG CTGTTCATCG TGGTGGTGTT GAGCCTGCTG
ATGCTGCAGT TGCGCAGCTT CTCGCGGATG GCGATGGTAT TCCTCACCGC ACCGCTGGGC
CTGATCGGCG TGACCCTGTT CCTGCTGCTG TTCCGCCAGC CGTTCGGCTT CGTGGCGATG
CTCGGGACCA TCGCCCTGGC CGGCATGATC ATGCGCAACT CGGTGATCCT GGTGGACCAG
ATCGAACAGG ACATCAGCCA CGGACTGGAT CGCTGGCACG CGATCATCGA GGCTACCGTG
CGGCGTTTCC GGCCCATCGT GCTGACCGCG CTGGCGGCGG TGCTGGCGAT GATCCCGCTG
TCGCGCAGCG TGTTCTTCGG GCCGATGGCG GTGGCGATCA TGGGCGGGCT GATCGTCGCC
ACCGTGCTCA CCCTGCTGTT CCTGCCGGCG CTCTATGCCG CCTGGTTCCG CGTGAGGAAG
GACGAGGCGC GGGCCTGA
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| Protein sequence | MSFNLSAWAL QNRQIVLYLM ILLGAVGALS YSKLGQSEDP PFTFKAMVVQ TNWPGASAEE
VARQVTERIE KKLMETGDYD RIVSFSRPGV SQVTFMARED IHSSEIPELW YQIRKKIGDI
RATLPQSIQG PFFNDEFGTT YGNIYALTGK GFDYAVMKDY ADRLQLQLQR IRNVGKVELI
GLQDEKIWID LSNTKLATLG LPLAAVQKAL EEQNAVASSG FFETASDRVQ LRVSGRFDSV
EEIRDFPIRV GDRTFRIGDV AEVRRGFNDP PAPRMRFMGE DAIGLAVSMK PGGDILVLGK
ALEAEFARLQ QSLPAGLELR KVSDQPAAVR TGVGEFIRVL AEALVIVLLV SFFSLGLRTG
LVVALSIPLV LAMTFAAMHY FGIGLHKISL GALVLALGLL VDDAIIAVEM MAVKMEQGYD
RLKAASFAWT STAFPMLTGT LITAAGFLPI ATAQSGTGEY TRSLFQVVTI ALVVSWFAAV
VFVPYLGAKL LPDLARLHAQ KHGGSADGYD PYATAFYQRF RRLVEWCVRY RKTVIVLTLA
AFVGALLLFR LVPQQFFPPS ARLELLLDIK LAEGASLRAT TEEVQRLEKM LQGHDGIDNY
VAYVGTGSPR FYLPLDQQLP AASFAQVVVL AKDLESRETL RKWLIERMNE DFPHLRSRIS
RLENGPPVGY PVQFRVSGED IPQVRELARK VADRMRENPH VVNVHLDWEE PSKVVYLSID
QERARALGVS TASLSQFLQS ALTGSHVSFY REDNELIEIL LRGTERERRD LSLLPSLAVP
TGNGRSVALS QIATLEYGFE EGIIWHRNRL PTVTVRADIY DDSLPATLVA QIAPTLEPIR
AELPDGYLLE VGGTVEDAAK GQSSVNAGVP LFIVVVLSLL MLQLRSFSRM AMVFLTAPLG
LIGVTLFLLL FRQPFGFVAM LGTIALAGMI MRNSVILVDQ IEQDISHGLD RWHAIIEATV
RRFRPIVLTA LAAVLAMIPL SRSVFFGPMA VAIMGGLIVA TVLTLLFLPA LYAAWFRVRK
DEARA
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