Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1427 |
Symbol | |
ID | 5358505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1446655 |
End bp | 1448274 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640810480 |
Product | MFS family transporter |
Protein accession | YP_001346811 |
Protein GI | 152984958 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGT ACGCAACGAC CCCTTCCTAC ACAGTGCCTG CGACCACGCC CCAGGAGGAG CGCAAGGTGA TCTTCGCCTC CTCGCTTGGC ACGGTCTTCG AGTGGTACGA CTTCTTCCTC TACGGTGCCC TGGCGGCGGT GATCAGCAAG CAGTTCTTCG CCGGCGTCAA CGACACCACG GCCTTCATCT TCGCCCTGAT GGCCTTCGCC GCCGGCTTCC TGGTGCGGCC CTTCGGCGCC CTGGTGTTCG GCCGCCTGGG CGACATGATC GGGCGCAAGT ACACCTTCCT GGTGACCATC CTGCTGATGG GGCTGTCGAC CTTCGCCGTC GGCCTGTTGC CCACCTATGC CTCGATCGGG GTCGCCGCGC CGATCATCCT GGTCACCCTG CGCATGCTCC AGGGCCTGGC CCTGGGCGGC GAGTACGGCG GCGCGGCGAT CTACGTCGCC GAGCACGCCC CGGCGAACAA GCGCGGCAGC TACACCAGCT GGATCCAGTC CACCGCGACC CTCGGCCTGC TGCTCTCGCT GCTGGTGATC CTGGCCTGCC GCCAGTTGAC CGGCGACGAG TTCGAGACCT GGGGCTGGCG CCTGCCATTC CTGCTGTCCA TCGTCCTGCT GGGCATCTCC ACCTGGATCC GCCTGTCGAT GCGCGAGTCG CCGGCATTCC TCAAGATGAA GGCCGAGGGC AAGGTCAGCA AGGCGCCGTT GCGCGAGTCC TTCACCAACT GGGGCAACCT CAAGGTGGTG CTGACCGCGT TGTTCAGCAT CAACGCGGGG CAGGCGGTGA CCTTCTACAC CGCACAGTTC TACGTGCTGT TCTTCCTCAC CCAGGTGCTC AAGGTCGATG GCGGCACCGC CAACGGCCTG CTGATCGTCG CCCTGGTGCT GGGCGCGCCA TTCTTCATCG TCGCCGGCTG GCTGTCCGAC CGCATCGGCC GCAAGCCGGT GCTGCTGGCC GGGCTGCTGC TCGCCACGCT GTTCTATTTC CCTCTGTTCA AGGCCCTGAC GCACTACGCC AACCCGGCCA TCGACCAGGC CAGCCGGCAA TCGCCGATCA GCGTGATGGC CGACCCGGCG ACCTGTACCT TCCAGTTCGA CCCGGTGGGC AAGGCGACCT TCGACAGTCC CTGCGACAAG GTCAAGACCT TTCTGGTCAA GAGCGGCCTA CCGTATTCCA CCTCGGCCGC GCCCGCCGGC AGCGAGGTGC GGGTGAGGAT CGGCAGTACC GAGATCGCCG GCTTCGACGC GACGGCCATG GCCGCCGCGG TGAAGGCCGC GGGCTATCCG CAGCAGGCCG ACAGCAGCCA GGTCGACAAG CCGATGGTGG TCGCCATCAT CTTCGCCCTG GTGCTGATCT CGACCCTCTG CTACGGCCCG CTGGCGGCGC TGATGGTCGA ACTGTTCCCG ACCCGCATCC GCTACTCCTC GCTGTCCCTG CCGTACCACA TCGGCAACGG CTGGTTCGGC GGTTTCCTGC CCACGGTCTC GTTCGCCCTG GTGGTGTACA CCGGCGACAT CTTCTACGGC CTCTGGTACC CGGTGCTGAT CACCGGCGGC AGCCTGGTCT GCGCCCTGCT GTTCCTCCGC GAGACCCGCC ACGCCGACAT CCACCGCTGA
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Protein sequence | MTEYATTPSY TVPATTPQEE RKVIFASSLG TVFEWYDFFL YGALAAVISK QFFAGVNDTT AFIFALMAFA AGFLVRPFGA LVFGRLGDMI GRKYTFLVTI LLMGLSTFAV GLLPTYASIG VAAPIILVTL RMLQGLALGG EYGGAAIYVA EHAPANKRGS YTSWIQSTAT LGLLLSLLVI LACRQLTGDE FETWGWRLPF LLSIVLLGIS TWIRLSMRES PAFLKMKAEG KVSKAPLRES FTNWGNLKVV LTALFSINAG QAVTFYTAQF YVLFFLTQVL KVDGGTANGL LIVALVLGAP FFIVAGWLSD RIGRKPVLLA GLLLATLFYF PLFKALTHYA NPAIDQASRQ SPISVMADPA TCTFQFDPVG KATFDSPCDK VKTFLVKSGL PYSTSAAPAG SEVRVRIGST EIAGFDATAM AAAVKAAGYP QQADSSQVDK PMVVAIIFAL VLISTLCYGP LAALMVELFP TRIRYSSLSL PYHIGNGWFG GFLPTVSFAL VVYTGDIFYG LWYPVLITGG SLVCALLFLR ETRHADIHR
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