Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1369 |
Symbol | |
ID | 5354197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1384079 |
End bp | 1385392 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640810422 |
Product | MFS family transporter |
Protein accession | YP_001346753 |
Protein GI | 152986012 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCG CCACCCTCGC CGCCGCCCCC ACTCCGGAAG CGGCCAACTC GACCACCCGG GTCGCCGTCG CCAGCTTCAT CGGCACCGCC ATCGAGTTCT ACGATTTCTA CGTCTACGCC ACCGCCGCCG CCCTGGTGAT CGGCCCGGTA TTCTTCCCGC AGACATCCGG CACCGCGCAG ATGCTCAGCG CCTTCCTCAC CTTCGGCATC GCCTTTCTCG CCCGTCCGCT GGGCTCGGCG CTGTTCGGCC ACTTCGGCGA CCGCATCGGG CGCAAGTCGA CCCTGGTCGC CTCGCTGCTG CTGATGGGGG TCTCCACCAC CCTGATCGGC GTCCTCCCCG GCTACGACAG CATCGGCTAC TGGGCTCCGT TGCTACTCTG CCTGCTGCGC TTCGGCCAGG GCCTCGGCCT CGGCGGCGAA TGGGGCGGCG CCGCACTGCT GGCTACGGAG AACGCGCCGG CCGGCAAACG CGCCTGGTTC GGCATGTTTC CCCAGCTCGG CCCGTCGATC GGCTTCCTCG CCGCCAACGG CCTGTTCCTG GCCCTGGCGA TGCTGCTCAG CGAGGAGCAA TTCCGTGAGT GGGGCTGGCG GATCCCGTTC CTGCTCAGCG CGGCGCTGGT GATCGTCGGC CTCTATGTGC GCCTGAAGCT GGCGGAGACC CCGGTGTTCG CCAAGGCCAT GGCCAGGCAC GAGAGGGTCC GCCTGCCGAT CGCCGAGCTG TTCGCCCAGC ACTGGCGGCC GACCCTGCTC GGCGCCCTGG CGATGGTGGT GTGCTATGCG CTGTTCTATA TCTCCACGGT GTTCTCGCTG AGCTACGGAG TCGCCAGCCT GGGCTTCAGC CGCGAGGAGT TCCTCGGTCT GCTGTGCCTC GCCGTGCTCT TCATGGCCGC CGCCACGCCA CTCTCGGCCT GGCTCAGCGA CCGCTTCGGG CGCAAGCCGG TACTGCTGCT CGGCAGCCTG GCGGCGCTCG CCTCCGGGTT CGCCATGGAG CCGCTGCTGA GCCAGGGCTC GGCATTCAGC GTCGCCCTGT TCCTCTGCAT CGAATTGTTC CTGATGGGCG TCACCTTCGC CCCGATGGGC GCGCTGCTGC CGGAAATCTT CCCCACCCAC GTGCGCTACA CCGGCGCGTC GGCGGCCTAC AACCTGGGCG GCATCCTTGG CGCATCGGTG GCGCCCTACA TCGCCCAGAA GCTGGTCGGC ATCGGCGGCC TGGGCTGGGT CGGCGGCTAC GTCTCGGCGG CGGCGCTGCT CAGCCTGCTG GCGGTACTGT GCCTGAAGGA GACCCGCGAC AACGACCTCG GCGCAGCACC CTGA
|
Protein sequence | MTAATLAAAP TPEAANSTTR VAVASFIGTA IEFYDFYVYA TAAALVIGPV FFPQTSGTAQ MLSAFLTFGI AFLARPLGSA LFGHFGDRIG RKSTLVASLL LMGVSTTLIG VLPGYDSIGY WAPLLLCLLR FGQGLGLGGE WGGAALLATE NAPAGKRAWF GMFPQLGPSI GFLAANGLFL ALAMLLSEEQ FREWGWRIPF LLSAALVIVG LYVRLKLAET PVFAKAMARH ERVRLPIAEL FAQHWRPTLL GALAMVVCYA LFYISTVFSL SYGVASLGFS REEFLGLLCL AVLFMAAATP LSAWLSDRFG RKPVLLLGSL AALASGFAME PLLSQGSAFS VALFLCIELF LMGVTFAPMG ALLPEIFPTH VRYTGASAAY NLGGILGASV APYIAQKLVG IGGLGWVGGY VSAAALLSLL AVLCLKETRD NDLGAAP
|
| |