| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1335 |
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| Symbol | |
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| ID | 5354986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 1346115 |
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| End bp | 1347395 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640810388 |
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| Product | putative transporter |
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| Protein accession | YP_001346719 |
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| Protein GI | 152985452 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.357089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCCA TCGCCATGAT CGCGGCCTTC GTGGTCAACC TCCTGCTCGG CCTGCCGCTG
TTCCTCTGCC TGCTGCTCAC CGCGCTGGTG GGGTTCCTCT TCGTCGACCC GGCGCTGTTC
GCCAACACCT TGCCGCAACG CTTCTTCGGC GGCATGGACA TCTTCTCGCT GATGGCGATC
CCGCTGTTCG TGCTGGCCGG CAACCTGATG AACCATTCCG GCATGACCCC GCGCCTGATG
CGCCTGGCCA ACGCCCTGGT CGGCCACTTC CGTGGCGGCC TCGGCCACGT CAACGTGGTC
GCCGGGGTGT TCTTCGCCGG GGTCAACGGC TCCGCCGCGG CCGACGCCTC GGCGCTCAGC
ACCCTGCTGG TGCCGGCGAT GGAGAAGGAG GGCTACTCGC GGCGCTTCGC CGCCGGGCTG
ACCGCCGGCA GCTCGCTGAT CGGCCCGATC ATCCCGCCAA GCATCTTCAT GATCCTCTAT
TCCTCGCTGA CCAACACCTC GGTGGGCGAG CTGTTCCTCG CCGGGGTGAT TCCCGGCCTG
CTGCTGGCCG CCGCCTTCAT GCTGCTGAAC GCGCTGTACG CCTACCGCAA CGGGCTGCAG
GCACGCCACG CGGCGCCGGC CTGGGGCGAG ATCCTGGCGG CGCTGTCCGG TGCCCTGACC
GCGCTCATCG CGCCGGTGAT CATCGTCGCC GGGATCGTCC TCGGCCTGGT CACGCCCACC
GAGTCGGGCG CCCTGATCGC TCTCTACGTG GCGCTGGTCG GCCTGCTCCA GCGCCAGCTG
AGCCTGGCCG GGCTGTGGAA CTCGCTGCGC GAGACGGTAC GCCTGACCAC CGCCATCTAC
GTGATCATCG CCGCCGCCTC GGTGGTCAAC TGGCTGCTCA ACTACGCCCA GGTCGCCAGC
GAGTTCGCCC GGTTGCTGGA GCCGTTCGGC CACTCGCCGA CCCTGATGCT GTTCATCATC
AGCGCGGTCA TCTTCATCTG CGGCATGCTC ATGGAAGAGG TCTCGGTGCT GATGCTGCTG
ACGCCGATCG TCGCCCCGGT GGCGCTGGCC GCCGGCGTCG ATCCGGTACA CCTCGGGCTG
ATCTTCACCC TGAACATCAC CATCGCCCTG ATCACCCCGC CGATGGGGGC CTGCCTGTTC
ATCGTGGCGA CCATCAGCCG CCTCGATATC CTGGAAATGT TCAAGGGTAT CTGGCCGTTC
ATCCTGGTCG CCCTGGGGGT GCTGTCGCTG CTGATCCTGT TCCCGTCCCT GACCCTGTGG
CTGCCACGCC TGCTCAACTG A
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| Protein sequence | MMAIAMIAAF VVNLLLGLPL FLCLLLTALV GFLFVDPALF ANTLPQRFFG GMDIFSLMAI
PLFVLAGNLM NHSGMTPRLM RLANALVGHF RGGLGHVNVV AGVFFAGVNG SAAADASALS
TLLVPAMEKE GYSRRFAAGL TAGSSLIGPI IPPSIFMILY SSLTNTSVGE LFLAGVIPGL
LLAAAFMLLN ALYAYRNGLQ ARHAAPAWGE ILAALSGALT ALIAPVIIVA GIVLGLVTPT
ESGALIALYV ALVGLLQRQL SLAGLWNSLR ETVRLTTAIY VIIAAASVVN WLLNYAQVAS
EFARLLEPFG HSPTLMLFII SAVIFICGML MEEVSVLMLL TPIVAPVALA AGVDPVHLGL
IFTLNITIAL ITPPMGACLF IVATISRLDI LEMFKGIWPF ILVALGVLSL LILFPSLTLW
LPRLLN
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