Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1268 |
Symbol | |
ID | 5356037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1280947 |
End bp | 1281840 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640810321 |
Product | putative HTH-type transcriptional regulator YbhD |
Protein accession | YP_001346653 |
Protein GI | 152984727 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATATG AGCTGCAAGA TCTTAAATCT TTCGTGAAAA TCGCAGAACT CGGCAGCTTT CATGAAGCTG CCGACGCGCT TCACCTGTCC CAACCAGCCC TGAGTCGGAG GATGAAGAAA CTCGAAGAAG GGCTAGGCAC GCCTCTCCTC GATCGCACTA CCCGGCGCGT CAGTCTGACC AGCGTCGGCC GTGACTTTCT GCCCAAGGCT CGCCGCCTGC TCGACGACTT CGAAGACTCG ATCCTCAGCA TTCGTGAACT CGCGGAGCGC CAGACGGGGC AGGTCACCCT TGCCTGCATC CCCACGGCGG CCTTCTACTT CCTGCCGTCC GTGATCCGCC TCTACAACGA GCAATACCCG AAAATCCGCA TCCGCCTGCT GGATCTGAGC GCCAACGATG GACTCGAGTC CGTATTGCGC GGCGAGGCCG ACTTCGGCAT CAACATGATG AGCGGCCAGC ACCCTGACAT CGAATTCGTC CCCCTGGTCC AGGAACACTT CGTGCTGGCC TGCCGACGGG ACCACGAGCT GGCCGGGCGC GCCTCGGTGA CCTGGACCGA ACTGGCCGAC TATCGCCTGA TCGGCGTAGG CCGGCTCAGC GGCAATCGCA TGCTGCTCGA CCACGCGCTC TCCGGCCTCA GTTGGCGCCC CAAATGGTTC TACGAGGTCC AGCACCTGTC CACCTCACTG GGCATGGTCG AAGCTGGGTT GGGCGTCTCG GCGATGCCCA GCCTGGCCAT GCCAGCGGAT GACCACCCGA CCCTGGTCAG CATCCCGCTG ATCGAACCGC AGGTCACACG CACCCTCGGG ATGGTCTACC GCCGTGGTGC TTCGCTCTCG CCCGCCGCGG AAAAGTTCGT TTCGATTCTC CTGGAAAAAT GGTCCGGCGA CTGA
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Protein sequence | MEYELQDLKS FVKIAELGSF HEAADALHLS QPALSRRMKK LEEGLGTPLL DRTTRRVSLT SVGRDFLPKA RRLLDDFEDS ILSIRELAER QTGQVTLACI PTAAFYFLPS VIRLYNEQYP KIRIRLLDLS ANDGLESVLR GEADFGINMM SGQHPDIEFV PLVQEHFVLA CRRDHELAGR ASVTWTELAD YRLIGVGRLS GNRMLLDHAL SGLSWRPKWF YEVQHLSTSL GMVEAGLGVS AMPSLAMPAD DHPTLVSIPL IEPQVTRTLG MVYRRGASLS PAAEKFVSIL LEKWSGD
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