Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1216 |
Symbol | |
ID | 5356831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1226318 |
End bp | 1226980 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640810269 |
Product | ABC transporter permease |
Protein accession | YP_001346601 |
Protein GI | 152989122 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCT TCAGCGTGCT TTCCCATCTC GACTGGACCC AGGTCGGCCA GCTCACCCTC CAGCACCTGC TGCTGGTGCT GGTCGCCGTG GGCCTGGCGA TCCTCGTCGG CGTGCCGCTG GGTGTGCTGA TGACCCGTTT CAAGTGGCTG GCCGGCCCGC TGCAGGGCGC CGCCACGGTG ATGCTGACGA TCCCCTCGAT CGCCCTGTTC GGCCTGCTGA TGCCGATCTA CTCGGTGTTC GGCCAGGGCC TCGGGCCGCT GCCGGCGATC ACCGCGGTGT TCCTCTATTC GCTGCTGCCG ATCCTGCGCA ACACCTACCT CGCCCTGACC GGCGTGGAGC CGGGCATCCG CGAAGCCGGC AAGGGCATCG GCATGACCTT CTGGCAGCGC CTGCGGATGG TCGACATTCC CCTCGCGGTG CCGGTGATCC TCGCCGGCGT GCGCACCGCC GTGGTGATGA ACATCGGCGT GATGACCATC GCCGCGGTGA TCGGCGCCGG CGGCCTGGGC GTGCTGATCC TCACTTCCAT CAGCCAGAGC AACATGCCGA TGCTGGTCGT CGGCGCGGTG CTGGTCAGCC TCCTGGCCAT CGTCGCCGAC CTGCTGCTGC AATGGCTGCA ACGCATCCTC ACCCCCAAGG GACTGCGCGC CGGCGCGCAC TGA
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Protein sequence | MDFFSVLSHL DWTQVGQLTL QHLLLVLVAV GLAILVGVPL GVLMTRFKWL AGPLQGAATV MLTIPSIALF GLLMPIYSVF GQGLGPLPAI TAVFLYSLLP ILRNTYLALT GVEPGIREAG KGIGMTFWQR LRMVDIPLAV PVILAGVRTA VVMNIGVMTI AAVIGAGGLG VLILTSISQS NMPMLVVGAV LVSLLAIVAD LLLQWLQRIL TPKGLRAGAH
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