| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1182 |
|---|
| Symbol | |
|---|
| ID | 5358414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1183356 |
|---|
| End bp | 1184531 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640810235 |
|---|
| Product | putative acyl-CoA thiolase |
|---|
| Protein accession | YP_001346567 |
|---|
| Protein GI | 152985331 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATA TCGTCATCGT CGCCGGCGCC CGCACTCCCA TGGGCGGCTT CCAGGGCAGC
CTGGCCGGGG TTTCCGCGGT CGAACTCGGC GCCGTCGCGA TCCGCGAGGC GGTGCAGCGC
GCCGGCATCG CCGCCGACGA CGTGCAGGAA GTGATCATGG GCTGCGTCCT GCCCGCCGGC
CTGAAGCAGG GGCCGGCCCG CCAGGCCGCG CTGGAGGCCG GGCTGCCCGC CGCCACCGGC
TGCACCACCA TCAACAAGCT GTGCGGCTCG GGGATGAAGG CGGTGATGCT GGCCCACGAC
CTGCTCAAGG CCGGCACCAA CCAGGTGATG GTCGCCGGCG GCATGGAAAG CATGTCCAAC
GCGCCCTACG TGCTGCCGAA AGCCCGCACC GGCCTGCGCA TGGGCCACGG CGAGATCAAG
GACCACATGT TCCTCGACGG CCTCGAGGAC GCCCGCACTG GCCGTTTGAT GGGTTCGTTC
GCCCAGGAGA CCGCCGACAA GTACGGCGTG ACCCGCGAGG AGATGGACGC CTATGCCATC
GAATCGCTCA GGCGCGCCCA GGCCGCCATC GCCGATGGCT CGCTGGCGGC GGAAATCGTC
CCGGTCACCG TCACCAGCCG CAAGGGCGAG ACCGTGGTGA AGGACGACGA GCAACCGCTG
ACCGCCAACC TGGAGAAGAT CCCGAGCCTC AAGCCGGCGT TCCGCAAGGA CGGCACCATC
ACCGCCGCGA ATGCCAGTTC GATCTCCGAC GGCGCCTCCG CGCTGGTCCT GATGACCGCC
GAGGAAGCCC GGCGCCGTGG CCTGAAGCCG CTGGCGCGAA TCGTCGGCCA TGCCACCCAG
AGCCAGGACC CGAGCGAGTT CACCCTGGCG CCGATCGGCG CGATGACCAA TCTGTTCGCC
AGGACCGGCT GGAGCAAGGA CGACGTCGAC CTGTTCGAGA TCAACGAAGC CTTCGCCATG
GTCACCATGC TCGCCATGCG CGAACACGGC CTCGATCATG CCAAGGTCAA TGTCTATGGC
GGCGCCTGCG CCCAAGGCCA CCCGGTCGGC TCCACCGGCT CGCGGATCAT CCTCACCCTG
ATCAACGCAC TGCGCCAGAA AGGCGGCAAG CGCGGCGTCG CCTCGCTGTG CATCGGCGGC
GGCGAAGCCA CCGCGGTGGC GGTCGAACTG CTCTGA
|
|---|
| Protein sequence | MSDIVIVAGA RTPMGGFQGS LAGVSAVELG AVAIREAVQR AGIAADDVQE VIMGCVLPAG
LKQGPARQAA LEAGLPAATG CTTINKLCGS GMKAVMLAHD LLKAGTNQVM VAGGMESMSN
APYVLPKART GLRMGHGEIK DHMFLDGLED ARTGRLMGSF AQETADKYGV TREEMDAYAI
ESLRRAQAAI ADGSLAAEIV PVTVTSRKGE TVVKDDEQPL TANLEKIPSL KPAFRKDGTI
TAANASSISD GASALVLMTA EEARRRGLKP LARIVGHATQ SQDPSEFTLA PIGAMTNLFA
RTGWSKDDVD LFEINEAFAM VTMLAMREHG LDHAKVNVYG GACAQGHPVG STGSRIILTL
INALRQKGGK RGVASLCIGG GEATAVAVEL L
|
|---|
| |