| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1173 |
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| Symbol | |
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| ID | 5357543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1171733 |
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| End bp | 1173769 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640810226 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_001346558 |
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| Protein GI | 152986031 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.742111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAC GCATCCCGGA TGAGCTGACC CTGCCGGAGC TCACCCTGCG AGGCCTGATC
CTCGGTGCGC TGATCACCGT GGTCTTCACC GCTTCCAACG TCTACCTCGG GCTGAAGGTC
GGCCTGACCT TCGCCTCGTC GATCCCGGCG GCGGTGATCT CGATGGCGGT GCTGCGCTAC
TTCACCGGCG CCAACATCCT CGAGAACAAC ATGGTGCAGA CCCAGGCCTC GGCGGCCGGC
ACCCTGTCCT CGATCATCTT CATCCTTCCC GGCCTGCTGA TGATCGGCTA CTGGAGTGGC
TTCCCGTTCT GGCAGACCGC GGCGATCTGC TCCATCGGCG GCATCCTCGG GGTGCTCTAC
ACCATTCCGT TGCGCCGGGT GATGGTGGTG CAGAGCGAAC TGCCCTATCC GGAAGGCGTG
GCGGCGGCGG AAATCCTCCG CGTCGGCAGT GATGGCGGCG AGCCGGAGGA GGGCGCCGCC
GCGCCTCGCG ACGACGGCCG CGCGCCCGGC CTGCGCGACA TCCTCGGCGG CGGCCTGGTG
GCGGCGCTGT TCAGCCTGTG CAGCAGCGGC TTCAAGGTCT TCGCCGAAGG CTTCAGCGTC
TGGCTGAGCG CCGGGCAGGC AGCATTCCGC CTGTCCACCG GTTTCTCCCT GGCGCTGGTC
GGCGCCGGCT ACCTGATGGG CATCACCGCT GGCATCGCGA TTCTCGTCGG CGTGGTGATC
TCCTGGGGCG TCGCGGTACC GCTGCTGACC GTCAACAGCC TGCCGGCCGA CGGCCAGAGC
CTGGCGGACC TGGCTTCCCA GCTATGGAGT TCGCAGGTGC GTTTCCTCGG CGCCGGGACC
ATCGGCGTGG CCGCGCTGTG GACCCTGGCG ACCCTGTTCA AGCCCATGGT CCGTGGCGTC
TGGGCGTCCC TCGGGGCGGT ACGCGGCAAC GCCCGGGCGA GCGGCCAGCG CACCGAGCTG
GACATGCCGG CCAGGTGGAT CCTGCTGATC GTCGGCGCAT TGCTGGTGTC GCTGACCGCG
GTCTTCGGGT ATTTCCTCGG CGAGGCCGCG CCGGACATGG CGCGGCCGGC GTTCTGGAGC
CTGGTCGCGG TGTGCGTGGT GTTCGCCTTC TTCTTCGGCT TCCTGATCGC CGCCGCCTGT
GGCTACATGG CCGGCCTGGT CGGCTCGTCG AGCAGTCCGA TCTCCGGGAT CGGGATCATC
GCGGTGATCC TGGTGTCGCT GCTGATCCTT GCCTTCGGCA GCGTCGAGGG CGACCTGCTG
CAGCGCCAGG GCGGCAAGCT GGCGATCGCC CTGGCGCTGT TCACCACCTC GGTGGTGCTG
GCCATCGCGG CGATTTCCAA CGACAACCTG CAGGACCTCA AGACCGGCTA CCTGGTCGGC
GCCACTCCCT GGCGCCAGCA GGTCGCGCTG ATCGTCGGCT GCATCGTCGG CGCGCTGGTG
ATCCCGCCGG TGCTGGAACT GCTCTATGGC GCCTATGGTT TCACCGGCAC CCTGCCGCGT
GACGGCATGG ATCCGAACCA GGCGCTGGCG GCGCCGCAGG CGACCTTGCT GACGGCGATC
GCCAGCGGGA TTTTCCACGA TGCGCTGAAC TGGAACATGA TCCTGATCGG CGTCGTGCTC
GGTATCGCCC TGATCCTCGT CGACCTGCTC CTGCGCCGCA CCGGCAAGGC CTGCCTGCCG
GTGCTGGCGG TGGGCCTGGG GATCTACCTG CCGCCGACCA TCGGCATGAC CCTGGTGGTC
GGCGCGCTGC TTTCCTGGCT GCTGGAAAAC GCCCTGAAGA AGCGCGCGGC GGCGGCCGGG
ACCGACCCGG AAAGCTACGC CGAAGTGCCG AAGCGGCGCG GCGTGCTGCT GGCCTCGGGA
CTCATCGTCG GCGAGAGCCT GATGGGCATC CTTCTCGCCG GGGTGATCGG CACCACCGGC
GAGGACGCGC CGCTGGCGCT GGTCGACGCC GGCTTCGCCG GCACCGCCCA GTGGCTGGGG
CTGGCGGTAT TCGTCGCGGT CTGCGTGCTG TTCTACCGGC GCGTGCTGGC GCGCTGA
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| Protein sequence | MQERIPDELT LPELTLRGLI LGALITVVFT ASNVYLGLKV GLTFASSIPA AVISMAVLRY
FTGANILENN MVQTQASAAG TLSSIIFILP GLLMIGYWSG FPFWQTAAIC SIGGILGVLY
TIPLRRVMVV QSELPYPEGV AAAEILRVGS DGGEPEEGAA APRDDGRAPG LRDILGGGLV
AALFSLCSSG FKVFAEGFSV WLSAGQAAFR LSTGFSLALV GAGYLMGITA GIAILVGVVI
SWGVAVPLLT VNSLPADGQS LADLASQLWS SQVRFLGAGT IGVAALWTLA TLFKPMVRGV
WASLGAVRGN ARASGQRTEL DMPARWILLI VGALLVSLTA VFGYFLGEAA PDMARPAFWS
LVAVCVVFAF FFGFLIAAAC GYMAGLVGSS SSPISGIGII AVILVSLLIL AFGSVEGDLL
QRQGGKLAIA LALFTTSVVL AIAAISNDNL QDLKTGYLVG ATPWRQQVAL IVGCIVGALV
IPPVLELLYG AYGFTGTLPR DGMDPNQALA APQATLLTAI ASGIFHDALN WNMILIGVVL
GIALILVDLL LRRTGKACLP VLAVGLGIYL PPTIGMTLVV GALLSWLLEN ALKKRAAAAG
TDPESYAEVP KRRGVLLASG LIVGESLMGI LLAGVIGTTG EDAPLALVDA GFAGTAQWLG
LAVFVAVCVL FYRRVLAR
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