Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1058 |
Symbol | is |
ID | 5358179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1056831 |
End bp | 1057718 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640810112 |
Product | geranyltranstransferase |
Protein accession | YP_001346444 |
Protein GI | 152986216 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.419692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCGG CGTACCAGGC GCGCTGCCAG GCGCGCGTCG ACGGCGCCCT GGACGCCCTG TTCGTCGCCC CTCGCGAAGA GCTGCATCGC CTCTACCAGG CGATGCGCTA CAGCGTCATG AACGGCGGCA AGCGGGTCCG CCCGCTGCTC GCCTACGCCG CCTGCGAAGC CCTTCAAGGC GAGGCCCAGC GTGCCGACGC CGCGGCCTGC GCGGTGGAGC TGATCCATGC CTACTCGCTG GTCCACGACG ACCTGCCGGC GATGGATGAC GACGACCTGC GCCGCGGCCA GCCGACCACC CACCGGGCCT TCGACGAAGC CACCGCGATC CTCGCCGCCG ACGGGCTGCA GGCGCTGGCC TTCGAAGTGC TCGCCGACGG CCGGCGCAAT CCGCAGGAAC CTACCGTCTG TCTGGAAATG CTCACCCACC TGGCCCGCGC CGCCGGTTCC GCCGGCATGG TCGGAGGCCA GGCGATCGAC CTCGGCTCGG TCGGCGTGGC GCTCGACCAG GCGGCCCTGG AGGTCATGCA CCGGCACAAG ACCGGCGCTC TGATCGAAGC CAGCGTGCGC CTCGGCGCCC TCGCCAGCGG CCGCGCCGAG GCCGCCACCC TGGCCGCCCT GGAGCGCTAC GCCCAGGCGA TCGGCCTGGC CTTCCAGGTA CAGGACGACA TCCTCGACGT GGAAAGCGAC ACCGCGACCC TCGGCAAGAC CCAGGGCAAG GACCAGGCGC ACAACAAGCC CACCTACCCC GCCCTGCTCG GCCTGGAGGC CGCCAAGGCC TATGCCCTGG AGCTGCGCGA CCAGGCCCTG GCGGCCCTCG AAGGCTTCCC GGCGAGCGCC GACCCGCTGC GCCAGCTGGC CCGCTATATC GTCGAGCGGC GCAACTGA
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Protein sequence | MIAAYQARCQ ARVDGALDAL FVAPREELHR LYQAMRYSVM NGGKRVRPLL AYAACEALQG EAQRADAAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HRAFDEATAI LAADGLQALA FEVLADGRRN PQEPTVCLEM LTHLARAAGS AGMVGGQAID LGSVGVALDQ AALEVMHRHK TGALIEASVR LGALASGRAE AATLAALERY AQAIGLAFQV QDDILDVESD TATLGKTQGK DQAHNKPTYP ALLGLEAAKA YALELRDQAL AALEGFPASA DPLRQLARYI VERRN
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