Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1017 |
Symbol | |
ID | 5354890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1017197 |
End bp | 1017949 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640810071 |
Product | chaperone CupB4 |
Protein accession | YP_001346403 |
Protein GI | 152984605 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.218387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCGCC GATGCCTGCA TCGCTGCGGC TTGGCGCTCG GCCTTTCTCT CGCGCTGCCG GCGAGCGTCG ACGCGGCGCT GAACGTGGTC GGTAGCCGCT TCATCTATCC GGCGCAGAGC GACGCCCTGA GCATCCGTAT CGGCAATGGC GGCCAGCGGC CGATCCTGGT CCAGGCCTGG CTGGATCGCG GCGATGGCTC CGCCGACCCG AGCACCGTCC AGGTGCCCTT CGTCCTGTCT CGGCCATTGT CGCGTGTCGA GCCGCAGGAA AAGTACGCGT TGCAGCTGCG CTACACCGGC GAGCCGCTGC CGGACGACCG TGAATCGCTG TTCTGGCTGA ACCTGCTCGA GGTGCCATCG CGGGACGAGG GCCGCGACAA CCTGCTGCTG CTGAGCTACC GCCTGCGGAT GAAGGTCCTG TTTCGCCCGC GGGGATTGCC CGGCGATCCA CGGGCGGCCG CCGGACAGGT GGCCTGGCGC CTGTTGCCGG CCGCGTCGCC GGGGAAGCTG GCGGTGCTCG AGGCCGACAA CCGTTCCCCC TATCACGTTT CCCTGACCCG CCTGGAACTG CGCGAGGGGG ACGTGGCGAT CGCCCTTGGC AACCCGACCC TGCCGCCATT CAGCCGTACC CCGCTGCCAC TGCCCAAGCC GGCGCGCGCG GGCGCGCGGG TTCACTACGA GGTCGTGGAT GACCAGGGCC GGATCGAGGT CGGCGTGGCG TCGACCGGCC CGCCCGTGGC GGAACACCCC TAG
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Protein sequence | MIRRCLHRCG LALGLSLALP ASVDAALNVV GSRFIYPAQS DALSIRIGNG GQRPILVQAW LDRGDGSADP STVQVPFVLS RPLSRVEPQE KYALQLRYTG EPLPDDRESL FWLNLLEVPS RDEGRDNLLL LSYRLRMKVL FRPRGLPGDP RAAAGQVAWR LLPAASPGKL AVLEADNRSP YHVSLTRLEL REGDVAIALG NPTLPPFSRT PLPLPKPARA GARVHYEVVD DQGRIEVGVA STGPPVAEHP
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