Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0914 |
Symbol | |
ID | 5356675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 915081 |
End bp | 916376 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640809968 |
Product | putative porin |
Protein accession | YP_001346300 |
Protein GI | 152985723 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGCCC CGTTTTCCCC TCCTTCGTCC CGCACGCTCC GCGGCCTGGG CGCCCTCGCC CTGTGTGGCG GTTTCGTCAC CCCGGCCAGC GCCGCCTTCC TCGAGGACAG CAGCGCGCGC CTGGAGGCGC GCACCGTCTA CTTCAACCGC GATTTCCGCG ACGGCAGCTC ATCCAGCCCG CAGGGCGCCG CCAAGCGCGA GGAAGCCGCG CAGGGCTTCA TCCTCGACCT GCGCTCGGGC TATACCGAAG GGGCGCTGGG CTTCGGCGTG GACACCCTGG CGATGCTCGG GATCAAGCTC GACTCCAGCC CCGCGGACAG CAACAGCGGC CTGCTGCCCT CCAGCGGCCA CGATCCGCGT CGCTCGGTCG ACCAGTACGC CAAGGCCGGC GTCGCCGGCA AGATGCGCTT CTCGCAGACA CAGTTCAGGT ACGGCGCGAT GCTGCCGGAC ATGCCGTTGC TGAAATACAA CGACGGACGC CTGCTACCGA CCCTATTCCA CGGCGCGCAG CTGACCAGCG AAGAGATCGC CGGGCTCAGG CTCTCCGCCA CCCGCCTGGA ACGCTACACC GCGCGTGACT CCAGCGACGC CCAGGATATC CGCGTGCACT GCAAGAACAA GCGCTACGCC TGCGACATCA CCGGCAGCCG CTTCGACGCC TACCAGCTCG ACTACCAGGT CAACGACGGC CTGCTGCTGC AATACGCCCA GGGCGGCCTG CGCAACGTCT ATCGCCAGCG CTACCTCGGC GCGGTGGGCA AGCGGCAGCT CGGCGCCGGC AAGCTGAGCG CCGACCTGCG CTGGTTCGAC AGCGAGGACG CCGGCGCGGC CCGCGCCGGC AGGATCGACA ACCGCGCCCT CAGCCTGCTG CTCGCCTACG CCCAGGGCGG CCACACGCTC AGCGCCGGCT GGCAGCGGAT GAACGGCGCC AGCTCGATGC CCTACCTCGA CGGCAGCAAT CCGTACCTGG CCAACTACCT GCAGGTGAAC GACTTCGCCA ACCCCGAGGA ACGCTCCTGG CAACTGCGCT ACGACTTCGA CCTGCGCAGC GTCGGCGTGC CCGGCCTGAG CTTCATGACC CGCTACGTCA ACGGCGACCA TATCCGCCTG GCCAACGGCG ACGAGGGCAA GGAGTGGGAG CGCGACGTCG AGCTCAAGTA CGTGGTACAG AGCGGCCGCT TCAAGGACCT CAGCCTGCGC CTGCGCAACG CCACCTACCG CACCGACTTC GAGCGCTCGG CGCGCGACGT GGACGAGGTG CGCCTGATCG CCAGCTACAA CCTGTCGCTG TTCTGA
|
Protein sequence | MSAPFSPPSS RTLRGLGALA LCGGFVTPAS AAFLEDSSAR LEARTVYFNR DFRDGSSSSP QGAAKREEAA QGFILDLRSG YTEGALGFGV DTLAMLGIKL DSSPADSNSG LLPSSGHDPR RSVDQYAKAG VAGKMRFSQT QFRYGAMLPD MPLLKYNDGR LLPTLFHGAQ LTSEEIAGLR LSATRLERYT ARDSSDAQDI RVHCKNKRYA CDITGSRFDA YQLDYQVNDG LLLQYAQGGL RNVYRQRYLG AVGKRQLGAG KLSADLRWFD SEDAGAARAG RIDNRALSLL LAYAQGGHTL SAGWQRMNGA SSMPYLDGSN PYLANYLQVN DFANPEERSW QLRYDFDLRS VGVPGLSFMT RYVNGDHIRL ANGDEGKEWE RDVELKYVVQ SGRFKDLSLR LRNATYRTDF ERSARDVDEV RLIASYNLSL F
|
| |