| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0905 |
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| Symbol | |
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| ID | 5354060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 907657 |
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| End bp | 908532 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640809959 |
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| Product | N-acetylmuramoyl-L-alanine amidase AmiD |
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| Protein accession | YP_001346291 |
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| Protein GI | 152986441 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.788402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA AAAACCTTTG TGTCCTGGCC TGCGCGCTGG GTCTGGCCGG CTGCCTGCAG
GGCGCCGTGG TCGAGCGGCC CGACGCGCAT GGGGAAACGC TGGCGCCGCC GCCGCTGGCG
ATCGACTACA ACAGCTACCG GACCAGCGCC GCCTACAACA AGAGAGTGCG CTACCTGGTA
CTGCACTACA CGGCGCTGGA CTTCTCGCGT TCGGTGGAGA TGCTCACCCG GGGGCCGGGC
AGCGCCCACT ACCTGGTGCC TTCGCCGGCC GACGCCAGCT ACCGCCGGGC CGGCTTCAGC
GGGCAGCGGA TCTTCAACCT GGTCGACGAG AACGACCGCG CCTGGCATGC CGGGGTCAGC
AGCTGGGGCG GACGCGAAGG GCTGAACGAC AGTTCCATCG GCATCGAGAT CGTCAACCTC
GCCCGCGACG ACGATGGCGT ATTCACCTTC CCGGACTACG AACCGTCGCA GATCGAGGCG
CTCAGGCAAC TGGCGCGGAA CATCCTGCAG CGCTACCCGG ACATCTCACC CAAGCACGTC
CTCGGGCATT CAGATATCGC CGTGGGGCGC AAGTCCGACC CCGGTCCGAA ACTGCCCTGG
AAGGAACTCC ACGACGCCGG CATCGGCGCC TGGTACGACG ACGCCACCCG CGATCGCTAC
CAGGCACGCT TCGAACGCGA CGGGCTGCCG TCGCGCGCAG AGTGGCTGGA AGCCTTGCGC
CGCTATGGCT ACGCCGTGCC CGAAAGGGGC AATGACGAGG ACTTCGCCAA TCTGCTGCGG
GCATTCCAGA TGCATTTCCG CCCGGACAAC CACGACGGCG TGGCGGATGC CGAGACGGCG
GCGATCCTCT ATGCGCTGAA CGAGCGCTAC TCCTGA
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| Protein sequence | MTTKNLCVLA CALGLAGCLQ GAVVERPDAH GETLAPPPLA IDYNSYRTSA AYNKRVRYLV
LHYTALDFSR SVEMLTRGPG SAHYLVPSPA DASYRRAGFS GQRIFNLVDE NDRAWHAGVS
SWGGREGLND SSIGIEIVNL ARDDDGVFTF PDYEPSQIEA LRQLARNILQ RYPDISPKHV
LGHSDIAVGR KSDPGPKLPW KELHDAGIGA WYDDATRDRY QARFERDGLP SRAEWLEALR
RYGYAVPERG NDEDFANLLR AFQMHFRPDN HDGVADAETA AILYALNERY S
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