| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0827 |
|---|
| Symbol | rplA |
|---|
| ID | 5356991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 818138 |
|---|
| End bp | 818833 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640809881 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_001346213 |
|---|
| Protein GI | 152987122 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0116287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC TGACCAAGCG CCAGAAGGCG ATTGCCGAGA AAGTAGTTGC CGGCAAGCAG
TACAGCTTCG AAGAGGCCGC CAAGCTGCTG GCCGAGCTGT CCACCATCAA GTTCAAGGAG
TCCGTGGACG TTGCCGTCAA CCTCGGCGTC GATCCGCGTA AATCCGACCA GGTCGTTCGT
GGTGCCACCG TTCTGCCGAA CGGCACCGGC AAGAGCGTCC GCGTTGCCGT CTTCACCCAG
GGTCCGGCCG CTGAAGCCGC TCTGGCTGCC GGCGCCGACA AGGTGGGCAT GGACGAACTG
GCTGCCGAAA TGAAAGGCGG CGACCTGAAC TACGACGTCG TCATCGCCTC CCCGGACGCA
ATGCGTGTCG TTGGTCAGCT GGGCCAGATC CTCGGCCCGC GCGGTCTGAT GCCGAACCCG
AAAGTCGGTA CCGTGACCCC GGACGTCGCC ACCGCGGTGA AGAATGCCAA GGCTGGTCAG
GTACGTTTCC GTACCGACAA GAACGGCATC ATCCACAGCT CCGTTGGCAA GGTCGATTTC
GAGCCGGCCA AGCTGCAGCA GAACGTCGAA GCTCTGCTGG CGGACCTGAA GCGCCTGAAG
CCGTCCTCGT CGAAAGGCGT GTACGTCAAG CGCGTGACCC TGAGCACCAC CATGGGTCCG
GGCCTGCAGA TCGACCTGGC TTCCCTGGAA GCCTAA
|
|---|
| Protein sequence | MAKLTKRQKA IAEKVVAGKQ YSFEEAAKLL AELSTIKFKE SVDVAVNLGV DPRKSDQVVR
GATVLPNGTG KSVRVAVFTQ GPAAEAALAA GADKVGMDEL AAEMKGGDLN YDVVIASPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VRFRTDKNGI IHSSVGKVDF
EPAKLQQNVE ALLADLKRLK PSSSKGVYVK RVTLSTTMGP GLQIDLASLE A
|
|---|
| |