| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0617 |
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| Symbol | nirF |
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| ID | 5359361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 635720 |
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| End bp | 636898 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640809671 |
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| Product | heme d1 biosynthesis protein NirF |
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| Protein accession | YP_001346012 |
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| Protein GI | 152988063 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGC GTCCCCTCGC GCCGCTTTTC CTCGCCCTGC TCGCCGGCTG TAGCCAGCAG
CCGCCCTTGC GCGGCAGCGG CGACCTCGGC GTGCTGATCG AACGCGCCGA CGGCAGCGTG
CAGATCCTCG ACGGCACGGC GAAGACCTCG CTGGCGCGGG TCGAAGGCCT CGGCGACCTG
TCCCACGCCT CCTTGGTGTT CTCCCGCGAC CAGCGCTACG CCTACGTGTT CGGTCGCGAC
GGCGGCCTGA CCAGGCTCGA CCTGCTGGCC CAGCGCATCG ACAAGCGCCT GATCCAGGGC
GGCAATAGCA TCGGCGGAGC GATCAGCCAG GACGGTCGGC TGGTCGCGGT ATCCAACTAC
GAGCCGGGCG GGGTCAAGGT GTTCGACAGC CGCACCCTGG AGCTGGTCGC CGAGATTCCC
GCCACCCGCC TCCCCGGCCA GGACAGGAAC TCCCGGGTGG TCGGCCTGGT CGACGCGCCG
GGGCAGCGTT TCGTGTTCAG CCTGTTCGAC AGCGGCGAGA TCTGGATCGC CGACTTCAGC
CAGGGCGACA CGCCGCGCCT GACCCGCTTC CGCGATGTCG GCAAGCAGCC CTACGACGCC
CTCATCAGCC CCGACGGGCG CTACTACATG GCCGGCCTGT TCGGCGAGGA CGGCATGGCG
CAGCTCGACC TCTGGCACCC GGAGCGCGGC GTCAGGCGCG TACTCGGCGA CTACGGCCGC
GGCCAGCGCA AGCTGCCGGT GTACAAGATG CCGCACCTGG AGGGCTGGAC CATCGCCAGC
GACCAGGCCT TCGTCCCGGC GGTCGGCCAT CACCAGGTGC TGGTGCTCGA CGCGCGCGAC
TGGAAGCAGA CCGACGCCAT CGATGTCGCC GGCCAGCCGG TGTTCGTCAT GACCCGCCCG
GACGACCGGC AGATCTGGGT CAACTTCGCC TACCCGGACA ACGACAAGGT GCAGGTCATC
GACAGCGAGA CCCACGAGGT GATCGAGACC CTGCGCCCCG GCCCCGGCGT ACTGCACATG
GAATTCAGCG GGCGCGGCGA CCAGGTCTGG ATCTCCGTGC GCGACGCCGA CCAGGTGCAG
GTCTGGGACC CGTACCGCCT GGAGCGCATC GGCAGCCTTC CGGCCCGCAG CCCGAGCGGC
ATCTTCTTCA GCCACCGCGC CCAGCACATC GGACTCTAG
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| Protein sequence | MNLRPLAPLF LALLAGCSQQ PPLRGSGDLG VLIERADGSV QILDGTAKTS LARVEGLGDL
SHASLVFSRD QRYAYVFGRD GGLTRLDLLA QRIDKRLIQG GNSIGGAISQ DGRLVAVSNY
EPGGVKVFDS RTLELVAEIP ATRLPGQDRN SRVVGLVDAP GQRFVFSLFD SGEIWIADFS
QGDTPRLTRF RDVGKQPYDA LISPDGRYYM AGLFGEDGMA QLDLWHPERG VRRVLGDYGR
GQRKLPVYKM PHLEGWTIAS DQAFVPAVGH HQVLVLDARD WKQTDAIDVA GQPVFVMTRP
DDRQIWVNFA YPDNDKVQVI DSETHEVIET LRPGPGVLHM EFSGRGDQVW ISVRDADQVQ
VWDPYRLERI GSLPARSPSG IFFSHRAQHI GL
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