| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0327 |
|---|
| Symbol | |
|---|
| ID | 5359759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 338772 |
|---|
| End bp | 340676 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640809381 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001345723 |
|---|
| Protein GI | 152987263 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
|---|
| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.627098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTT CGATCGCCAC CGTATCGCTG AGCGGTACCC TGCCGGAGAA GCTCGAAGCC
ATTGCCGCCG CCGGATTCGA TGGAGTGGAA GTCTTCGAGA ACGACCTGCT CCATTACGAC
GGCAGCCCTC GCGATGTGCG CCGGCTGTGC GCCGACCTGG GACTCGATAT CCTGTTGTTC
CAGCCGTTCC GCGACTTCGA GGGCTGCCGC CGGGAGCGCC TGGCGCGCAA CCTGGAGCGC
GCCGAGCGCA AGTTCGACCT GATGCAGGAG CTGGGCACCG ACCTGGTGCT GGTCTGTAGC
AACGTCGCCG CGGACGCCCT CGGCGAGCCG GCATTGCTGG TCGACGATCT TCGCCTGCTG
GCCGAACGCG CTGCCGCCCG GGGCCTGCGT ATCGGCTACG AGGCATTGGC CTGGGGCCGC
CAGGTCAGCA CCTGGGAGCA GGCCTGGGAA TTGGTGCGGC GGGCCGACCA GCCGAACCTC
GGTCTGATCC TCGACAGTTT CCACACCCTC TCGTTGAACG GCGATGCTCG TGGCATCGCC
GGGCTACCCG CGGAGAAGAT CTTCTTCGTA CAGATGGCCG ATGCGCCGTT GCTGGCCATG
GACGTGCTGG AGTGGAGCCG GCATTTCCGC TGCTTCCCGG GGCAGGGCGG CTTCGACCTG
GCGGGCTTCC TCGCGCCGAT CGTCGCCAGC GGCTACCGTG GGCCGCTGTC GCTGGAGGTC
TTCAACGACG GCTTCCGCGC CGCGCCGACC CGCGCCAACG CCGCCGACGG CCTGCGCGCG
CTGCTCTACC TGGAGGAAAA GACCCGCGAG CGCCTGCGCC GCGAGGCACC GCAGGTGGCC
GTGGACGGGC TTTTCGCGCC GCCGCCGGCG AGCGTCTGCG ACGGCATCGA GTTCCTCGAG
TTCGCCGTCG ACGAAGCGTT GCGCGCGCGC CTGGGTCAGT GGCTGCGCCA ACTGGGCTTC
GCCAGGGTCG GGCAGCATCG TTCGAAGAAT GTCAGCCTGT TGCGCCAGGG TGGGATCAAC
CTGGTGCTGA ACGCCGAGCC CTATTCCTTC GCCCACGGCT TCTTCGAGGC CCATGGGCCT
TCGCTGTGCG CCACCGCCCT GCGCGTGCGC GACGCCGGCC AGGCGCTGGA GCGCGCGCGC
CGCTACGGCG GCCAGCCCTA TCGCGGGCTG GTCGGTCCCA ACGAACGGGA AATCCCGGCG
GTGCGTGCCC TCGACGGCAG CCTCCTGTAC CTGGTCGAGC AGGAGGGCGG GGGGCGCGAC
ATCTACCAGA CCGACTTCGA GATGACCGGC GAGGCGACGC CCGGCCTCGG CCTGCGGCGC
ATCGACCATG TGGCCATGGC GTTGCCCGCC GAGGGCCTGG ACAGCTGGGT GCTGTTCTAC
AAGAGCCTGT TCGACTTCAG CGCCGACGAC GAGGTGGTCC TGCCCGATCC CTACGGCCTG
GTCACCAGCC GCGCGGTGCG CAGCCGCTGC GGCCAGGTGC GCCTGCCGCT GAACATTTCC
GAGGACCGCA ACACCGCCAT CGCCCGTGCG CTGTCCAGCT ATCGCGGCTC CGGCGTGCAC
CACATCGCCT TCGACTGCGC GGACATCTTC GCCGCCGTGG CCCAGGCCAA GGAGGCCGGC
CTGACGCTGT TGGAAATCCC GCTGAACTAT TACGACGACC TCGCCGCGCG CTTCGACTTC
ACCGAGGAGT TCCTCAGCGA GCTGGCCTAT TACAACGTGC TCTATGACCG TGACGCCCAG
GGCGGCGAGC TGTTCCACGT GTTCACCGAG CCGTTCGAGG AGCGCTTCTT CTTCGAGATC
CTCCAGCGCC GCCATGGCTA CGCCGGCTAT GGCGCCGCCA ACGTGGCGGT GCGCCTGGCG
GCGATGGCCC AGGCCCGGCG CGGTGTGCGC CGGGTCAAAC TGTGA
|
|---|
| Protein sequence | MQRSIATVSL SGTLPEKLEA IAAAGFDGVE VFENDLLHYD GSPRDVRRLC ADLGLDILLF
QPFRDFEGCR RERLARNLER AERKFDLMQE LGTDLVLVCS NVAADALGEP ALLVDDLRLL
AERAAARGLR IGYEALAWGR QVSTWEQAWE LVRRADQPNL GLILDSFHTL SLNGDARGIA
GLPAEKIFFV QMADAPLLAM DVLEWSRHFR CFPGQGGFDL AGFLAPIVAS GYRGPLSLEV
FNDGFRAAPT RANAADGLRA LLYLEEKTRE RLRREAPQVA VDGLFAPPPA SVCDGIEFLE
FAVDEALRAR LGQWLRQLGF ARVGQHRSKN VSLLRQGGIN LVLNAEPYSF AHGFFEAHGP
SLCATALRVR DAGQALERAR RYGGQPYRGL VGPNEREIPA VRALDGSLLY LVEQEGGGRD
IYQTDFEMTG EATPGLGLRR IDHVAMALPA EGLDSWVLFY KSLFDFSADD EVVLPDPYGL
VTSRAVRSRC GQVRLPLNIS EDRNTAIARA LSSYRGSGVH HIAFDCADIF AAVAQAKEAG
LTLLEIPLNY YDDLAARFDF TEEFLSELAY YNVLYDRDAQ GGELFHVFTE PFEERFFFEI
LQRRHGYAGY GAANVAVRLA AMAQARRGVR RVKL
|
|---|
| |