| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0318 |
|---|
| Symbol | pcaC |
|---|
| ID | 5357016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 330433 |
|---|
| End bp | 330834 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640809372 |
|---|
| Product | gamma-carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_001345714 |
|---|
| Protein GI | 152986013 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.623335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA AACAACGCTA CGAAGCCGGC ATGCAAGTGC GCCGCGCGGT GCTCGGCGAC
GCCCATGTCG ACCGCAGCCT GGCCAGCCTG ACGCCGTTCA ACGAAGAGTT CCAGGAGATG
ATCACCCGCC ACGCCTGGGG CGACATCTGG ACCCGCCCGG GGCTGCCGCG GCACACCCGT
AGCCTGGTGA CCATCGCCAT GCTGATCGGC ATGAACCGCA ACGAGGAACT CAAGCTGCAC
CTGCGCGCGG CGAAGAACAA CGGCGTGAGT CGCGACGAGA TCAAGGAAGT GATCATGCAG
AGCGCCATCT ACTGCGGCAT TCCGGCGGCC AACGCGACCT TCCACCTGGC CGAGTCGGTG
TGGGACGAAC TGGGCGTGGA ATCGCAGCAG GAGACCCGCT AG
|
|---|
| Protein sequence | MDEKQRYEAG MQVRRAVLGD AHVDRSLASL TPFNEEFQEM ITRHAWGDIW TRPGLPRHTR
SLVTIAMLIG MNRNEELKLH LRAAKNNGVS RDEIKEVIMQ SAIYCGIPAA NATFHLAESV
WDELGVESQQ ETR
|
|---|
| |