Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0296 |
Symbol | mdcE |
ID | 5354082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 308796 |
End bp | 309602 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640809350 |
Product | malonate decarboxylase subunit gamma |
Protein accession | YP_001345692 |
Protein GI | 152988758 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03134] malonate decarboxylase, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.526825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGC CTTCCGCATC CCGTGGTCAG GCCTGGTTCC AGGCGCTGGC CGGAAACCTC CCGCCGCGCG CCGGCGATCC CGCCTCGCTG CGCGTCGCCG ACCTCGAGCT GGACGGCTAC CCGGCGCGGG TCCTGGCAGT CGTGCCGGAC GCCGGCAACC CCTTCCCGCG CGCCCGCCAG GGCGAGGTCG GGCTGCTCGA GGGCTGGGGC CTGGCCGCCG CCGTCGACGA GGCGCTGGAG GCCGACCGCG AGGCGCCGCG CAAGCGTGCG CTGCTGGCCA TCGTCGACGT GCCGAGCCAG GCCTACGGCC GCCGCGAGGA GGCCCTGGGT ATCCACCAGG CGCTGGCCGG GGCGGTGGAC GCCTACGCCC GCGCCCGGCT CGCCGGGCAT CCGCTGATCG GCCTGCTGGT GGGCAAGGCG ATGTCCGGCG CGTTCCTCGC CCATGGCTAC CAGGCCAATC GCCTGATCGC ACTGCGCGAT CCGGGGGTGA TGGTCCACGC CATGGGCAAG GCCGCCGCCG CGCGGATCAC CCTGCGCAGC GTCGAGGAAC TGGAGGCGCT GGCGGCGCAG GTGCCGCCGA TGGCCTACGA CATCGACAGC TACGCCTCGC TCGGGCTGCT CTGGAAGACC CTGGAGGTAG AGGCCATCGA AGCGCCTACG ACGAACGATC TGGCGCGGGT ACGCGAATGC CTGGGCGCGG CGCTGCTCGA CATCCTCGCC GGCCCGCGCG ACCTGGGTGG CCGCCTCGGC GCGGCCAATC GCGAGGCGTC GGCGCGCGTG CGCCGGTTGC TGCGCGAGCA GTGGTGA
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Protein sequence | MSQPSASRGQ AWFQALAGNL PPRAGDPASL RVADLELDGY PARVLAVVPD AGNPFPRARQ GEVGLLEGWG LAAAVDEALE ADREAPRKRA LLAIVDVPSQ AYGRREEALG IHQALAGAVD AYARARLAGH PLIGLLVGKA MSGAFLAHGY QANRLIALRD PGVMVHAMGK AAAARITLRS VEELEALAAQ VPPMAYDIDS YASLGLLWKT LEVEAIEAPT TNDLARVREC LGAALLDILA GPRDLGGRLG AANREASARV RRLLREQW
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