| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0292 |
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| Symbol | mdcA |
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| ID | 5355981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 305097 |
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| End bp | 306761 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640809346 |
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| Product | malonate decarboxylase subunit alpha |
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| Protein accession | YP_001345688 |
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| Protein GI | 152988025 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.133882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAA CCCTCTCCCC TCCGCCGCAG TGGTCGCGGC GCCGCCAGGA AAAGCAGCGG
CGCCTGGAAC GCGCGCGCAG CCTGGCCGAC GGCGTGGTGC TGCCGCGCGA TCGGATCGTC
GCCGCGCTGG AAGCGCTGAT CGCGCCGGGC GACCGGGTAG TGCTGGAAGG CAACAACCAG
AAGCAGGCGG ACTTTCTCTC CCGCTCGCTG GCGCGGGTCG ACCCCGGCAG GCTGCACGAC
CTGCACATGA TCATGCCCAG CGTCGGCCGC CCGGAGCACC TCGACCTGTT CGAGCTGGGC
ATCGCGCGCA AGCTCGACTT CTCCTTCTCC GGCCCGCAGA GCCTGCGCAT CGGCCAGTTG
CTCGAGGATG GGCTGCTGGA GATCGGCGCG ATCCACACCT ACATCGAGCT GTATGCGCGG
CTGCTGGTCG ACCTGATCCC CAACGTGGCG CTGGTCGCCG GCTTCATGGC CGATCGCGAG
GGCAATGTCT ATACCGGGCC GAGCACCGAG GACTCCCCGG CGCTGGTCGA GCCCACCGCG
TTCAGCGACG GCATCGTCAT CGTCCAGGTC AACCGTATCG TCGACGACCC GCGCGACCTG
CCGCGCGTGG ACATCCCGGC GTCCTGGGTG GACTTCGTGG TCGAGGCCGA CCAGCCGTTC
TACATCGAGC CGCTGTTCAC CCGCGACCCG CGCCACATCA AGCCGGTCCA CGTACTGATG
GCGATGATGG CGATCCGCGG CATCTACCAG CGGCACAACG TGCAGTCGCT GAACCACGGC
ATCGGCTTCA ACACCGCGGC GATCGAGCTG ATCCTGCCGA CCTACGGCGA GTCACTCGGT
CTCAAGGGCA AGATCTGCCG GCACTGGACC CTCAACCCGC ACCCGACCCT GATCCCCGCC
ATCGAGAGCG GCTGGGTCGA GAGCGTGCAC TGCTTCGGCA CCGAACTGGG GATGGAGGGC
TACATCGCCC AGCGTCCCGA CGTGTTCTTC ACCGGCCGCG ACGGCTCGCT GCGTTCCAAC
CGGATGTTCT GCCAGCTGGC CGGGCAATAC GCCGTCGACC TGTTCATCGG CGCGACCCTG
CAGGTCGATG GCGACGGCCA TTCCTCCACC GTCACCCGCG GTCGCCTGGC CGGCTTCGGC
GGTGCGCCGA ACATGGGCCA CGATCCGCGC GGGCGGCGCC ACTCGACGCC AGCCTGGCTG
GACATGCGGC CTGAACCCGA GGCGCTGCTT GAGCGCGGCA GGAAGCTGGT GGTGCAGATG
GTCGAGACCT TCCAGGACGG CGGCAAGCCG ACCTTCGTCG AGCGGCTCGA CGCGCTGGAG
GTGGCGCGCC AGACCGGCAT GCCGCTGGCG CCGGTGATGA TCTATGGCGA CGACGTCACC
CATGTGCTCA CCGAGGAAGG CATCGCCTAC CTGTACAAAG CGCGCTCGCT GGAGGAGCGC
CGGGCGATGA TCGCGGCGGT GGCCGGGATC AGCCCGATCG GCCTGCGCCA CGACCCGCGC
GAGACCCAGC GCATGCGTCG CGAGGGGCTG ATCGCGCTGC CCGAGGACCT CGGCATCCGT
CGCACCGACG CCTCGCGCGA GCTGCTGGCG GCGAAGAGCA TCGCCGAGCT GGTCGAATGG
TCCGGCGGGC TGTACCAGCC GCCGGCGCGT TTCAGGAGCT GGTGA
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| Protein sequence | MTTTLSPPPQ WSRRRQEKQR RLERARSLAD GVVLPRDRIV AALEALIAPG DRVVLEGNNQ
KQADFLSRSL ARVDPGRLHD LHMIMPSVGR PEHLDLFELG IARKLDFSFS GPQSLRIGQL
LEDGLLEIGA IHTYIELYAR LLVDLIPNVA LVAGFMADRE GNVYTGPSTE DSPALVEPTA
FSDGIVIVQV NRIVDDPRDL PRVDIPASWV DFVVEADQPF YIEPLFTRDP RHIKPVHVLM
AMMAIRGIYQ RHNVQSLNHG IGFNTAAIEL ILPTYGESLG LKGKICRHWT LNPHPTLIPA
IESGWVESVH CFGTELGMEG YIAQRPDVFF TGRDGSLRSN RMFCQLAGQY AVDLFIGATL
QVDGDGHSST VTRGRLAGFG GAPNMGHDPR GRRHSTPAWL DMRPEPEALL ERGRKLVVQM
VETFQDGGKP TFVERLDALE VARQTGMPLA PVMIYGDDVT HVLTEEGIAY LYKARSLEER
RAMIAAVAGI SPIGLRHDPR ETQRMRREGL IALPEDLGIR RTDASRELLA AKSIAELVEW
SGGLYQPPAR FRSW
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