Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0279 |
Symbol | |
ID | 5354726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 295271 |
End bp | 296065 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640809333 |
Product | hypothetical protein |
Protein accession | YP_001345675 |
Protein GI | 152985598 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACCC CCCAGCCCGT CGATGCCCGC ACGCAGCCCT GGCGCGAGAC GCCCGGCGGC GACCTGGTGG AGTTCGGCCG GCCGGTGCGC CAGGCGTTGC ACCTGGTTCG CCACAACCCG GCACAGGGTC GGGTGCTCAG CCGGCGCGAG ACGATCCTGC TGGTCCTGTT CGCCCTGACC CTGCACGGAG CGGTGATCCA TTGGCTGAGC CAGCAGAGAA CCCCGGCGCT GCCCGAGGTG CCGCCACAGG TGCCGCCGAT GACCATCGAG TTCACCGCCC CGGCGCCGCC GGTGGTGGAA CCGCCGCCGC CCGAGCCGTT GGCGCCGGTG GTCGAGGAAC CGCCACCGCC GGTGGTCGAC GAGAAGGCGG TGAAGCCGCC ACCGCCGAAG CCGGTGCCCA AGCCGAAACC CAAGCCCAAG CCGCAACCCC GGCCCGAGCC GGCGCCGAAG GCCGTCGAGC CGGCTCCGCC CGCGCCGCCG CAACCCGCCG CGCCACCCGC CCCGCCGGCG CCGCTGACGC CGCCGTCGGC GAACGCCGGC TACCTGCACA ACCCGGCGCC GGAATACCCC GCCCTGGCCA TGCGCCGCGG CTGGGAGGGC ACCGTGCTGT TGCGGGTGCA TGTCCTCGCC AGCGGCAGCC CGAGCGAGAT CCAGGTGCAG AAGTCGAGCG GACGCGAAGC CCTCGACCAG GCCGCGGTGA AAGCGGTCAA GCGCTGGTCC TTCGTTCCCG CCAAGCGCGG CGACAAGGCC GAGGACGGCT GGGTCGGCGT ACCGATCGAT TTCAAGTTGA ACTGA
|
Protein sequence | MATPQPVDAR TQPWRETPGG DLVEFGRPVR QALHLVRHNP AQGRVLSRRE TILLVLFALT LHGAVIHWLS QQRTPALPEV PPQVPPMTIE FTAPAPPVVE PPPPEPLAPV VEEPPPPVVD EKAVKPPPPK PVPKPKPKPK PQPRPEPAPK AVEPAPPAPP QPAAPPAPPA PLTPPSANAG YLHNPAPEYP ALAMRRGWEG TVLLRVHVLA SGSPSEIQVQ KSSGREALDQ AAVKAVKRWS FVPAKRGDKA EDGWVGVPID FKLN
|
| |