Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0077 |
Symbol | |
ID | 5357729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 86865 |
End bp | 90068 |
Gene Length | 3204 bp |
Protein Length | 1067 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640809131 |
Product | type I restriction-modification system subunit R |
Protein accession | YP_001345473 |
Protein GI | 152989118 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGACA GCAAGGAAGC CCAGTTCCAG CAGGACATCA TCACCGCCAT GGTCGCCCAG GGCTGGCTGA CCGGCCCGGC CAGTGGCTAT GACCGCCGCA CGGCGCTGTA TACCGAGGAC TTTCTCGGTT ACTTCAAGGA CGCCTGGCCC GAGCGTTGGG ACAAGTTCGC CAAAGCCAAC CCGAACAACC CTGAAAGCGT GCTGGTGCAG AAGCTGGTGC GCGAGCTGGA GCAGGACGGC ACCCTGGATG TGCTGCGCCA TGGCTTCAAG CTGCCGGGGG TGAAGATCGA GGCATGCAGC TTCAAGCCCG ACCACGGCAT GAATCCGGAC ACCCTCAAGC GCTACCAGTG CAACCGCCTG CGCGTGGTGC AGGAGGTGTC GTACTCCCCC CACTGCCGTG AAGGGGAATA CAACCCGCGT CTGGATCTGG TGCTGTTCGT CAACGGCATC CCCGTCGCCA CGCTGGAGCT GAAAAGCGAG TTCAAGCAGA GCGTGGAAAA TGCCAAGCGC CAGTATCGCT ACGACCGCCC GGTGAAAGAC CCGCTGACGC GCAAGCCCGA GCCGCTGCTG ACCTTCAAGC GCGGCGCGTT GGTGCACTTT GCCGTCAGCC AGGATGAGGT GGCGATGACC ACCCAACTGG CCGGCAAGGA AACCTTCTTC CTGCCGTTCA ACCTCGGCAG CCTCGACGGC GGTGCCGGCA ACCCGCCCGC GCCGGATGAC AGCCAGTACG CCACCGGCTA CCTGTGGCAG CGCCTGTTCC AGCCGGATGC CTGGCTCAAG GTGCTGGGCC GCTTCCTGCA CCTGCAGAAG AGCGTGAAGG AAGATGCAGA CGGCAAGCGC GTGACCAAGG AGACCCTGAT CTTCCCGCGC TACCACCAGT GGGAAGTGGT CAACAGGCTG ATCGAGACCA CCCGCAATGA GGGGCCGGGC AAGCGTTACC TGATCCAGCA CAGCGCCGGC TCGGGTAAGT CCAACTCGAT TGCCTGGACG GCACACCAGC TGGCCTCGCT CTACGATGCC GAAGGCCAGC GCCTGTTCAA CTCGGTGATC GTGATTACCG ACCGCACCGT GCTGGACAAG CAGCTGCAGG ACACCATCTA CCAGTTCGAG CACGCCCAGG GCGTGGTCAA GTGCATCACC CGCGATATCG GCAGCCAGAG CAAGTCCGAG CAACTCGCCG AGGCGCTGGC CGAGCAGACG CGCATCATCA TCGTCACCAT CCAGACCTTC CCGGCGCTGT TCGATGCGCT GGACAAGTAC CCCAAGCTGG CCAGCGGGCA CTATGCGGTG ATTGCCGACG AGGCGCACTC CTCGCAAACC GGCTCATCGG CCAGCAAGCT CAAGCAGATT CTCGGCAGCG ATGCCGTCTT GGGCAAAGAA GGGGACGCGG AAGAAATCAG CGCCGAAGAG TTGCTGGATG CCGCCGTGGC CGCCCGTGCG CCCAACGAGC GCATCAGCTA CTACGCCTTT ACCGCCACGC CCAAGGCCAA GACCCTGGAG CTGTTCGGTC GCGTTCCCGA CCCAACATTG CCGGCGAGCG CCGACAACAA GCCCGAGGCG TTCCACCTGT ACTCCATGCG CCAGGCCATC GAGGAAGGTT TCATCCTCGA TGTGCTGCAG AACTACACCA CCTACAGCAC CGCCTGGAAG ATCGCCCACC CGGACGGCGA CGACGAGGAA GTGGACTCGA AGAAGGCGCG CATGAAGCTG GCGCGCTGGG TGCGCCTGCA TCCGTACAAC ATCAACCAGA AGGTGGAGGT GATCGTCGGA CACTTCCGCG CCAATATCCG CCACCTGCTG GGCGGCCAGG CCAAGGCCAT GGTGGTCACC AGCAGCCGGC AGGAAGCCGT GCGCTACCAG TTGGCAGTGC AGGCCTATGT GAAGCAGATG GGCTACACCG ATGTGCACCC GCTGGTGGCC TTCTCCGGCA GTGTGCTGCC GGATGGGGTG ATTCCCGAAG AGGTGACGGA AAGCAGCAGC CTGCTCAACC CCGGCTTGAA CGGGCGTGAT CTGGCTGAGG CCTTCGACAC CCAGGACTTC AACGTGATGA TCGCCGCCAA CAAGTACCAG ACCGGCTTCG ATCAGCCCAA GCTCTGCGCC ATGTACGTGG ACAAGAAGCT GCAAGGCGTG GACTGCGTGC AAACCCTGTC GCGCCTGAAC CGTACCTTCG GCGACAGCAA GCCGACCTTC ATCCTCGACT TCTTCAACGA TCCTCAGGAC ATTCTCGACG CCTTTCTGCC GTACTACACC AAGGCCGAGC TGACTGATGT GACCGACCCG CAGCTGATCT ATGACCTGCA GAAGAAGCTG GATGCCGAGG GCATTTACCA CTGGGAGGAA GTGGCGGCAT TCGCGCTGGC TTTCTTCGAC CCCAAGGCCG CCGCCAGCAA GCTCAGTTAC TACTGCGCGC CGGCCAAGGA GCGCTTCGCC AAGCGCTACA AGCTGGCCCA GGAATCACGC CAGCACGCGC TGGACTTCAA GCGTACCGCC GAGCAGAACG GCGACAGCGC CGGCGTGAAA AAGGCCGAAG CAGCCGTGAA GGAAGCCGGC GAGCAGGTGG ATCAGCTCGA CCTGTTCAAG AAGAACCTGC AGAGCTTCGT GCGCCTGTAC GAGTTCCTCT CGCAGATTAT TCCGTATGAG GATCGTGAGC TGGAGCAGCT GTGCGTGTAT GCCAAGCACC TGCACCCGCT GCTGCGTGTG GATCGCCTCG ATCAGGAAGA CGTGGACGTG GGCGAACTGC AACTGACCCA CTACCGCCTG ACCAAGCGCG CCGAGCACCA GCTGCGCTTG AGCGAGGAAC AAGGCGACTA CGGCCTCAAA CCGCCTACAG GACTGGGCAG CGGCAAACCC CATGACCCGG AGAAGAAGCG GCTATCGGAA ATCATCGAGG CGCTGAACGA TATCTTCGGT GCCGAGGTGA GCGATGAGGA TCAGCTGCAG TTCCTCACCG GCATCGCCAA TCGCATCAGT CGTCAGGAGG ATGTGATGGC CCAGGTCAAC AACCACTCGG TCGAACAGGT GATGCATGGC CTGTTCCCCA AGCGCGTACT GGACACCGTG CTGGATGCCA TGACCGACAA CGAAAAGATG TCGTTGGAAG TGCTGGATAA CGAGACCAAG AGCCGGGCGT TTGCGTTGGT GATTTTGAAG ATGCTGACGG CGGCTGGAGG TTTGGGGCAA GGTATCAGCG GCGCTGCTGT CTGA
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Protein sequence | MADSKEAQFQ QDIITAMVAQ GWLTGPASGY DRRTALYTED FLGYFKDAWP ERWDKFAKAN PNNPESVLVQ KLVRELEQDG TLDVLRHGFK LPGVKIEACS FKPDHGMNPD TLKRYQCNRL RVVQEVSYSP HCREGEYNPR LDLVLFVNGI PVATLELKSE FKQSVENAKR QYRYDRPVKD PLTRKPEPLL TFKRGALVHF AVSQDEVAMT TQLAGKETFF LPFNLGSLDG GAGNPPAPDD SQYATGYLWQ RLFQPDAWLK VLGRFLHLQK SVKEDADGKR VTKETLIFPR YHQWEVVNRL IETTRNEGPG KRYLIQHSAG SGKSNSIAWT AHQLASLYDA EGQRLFNSVI VITDRTVLDK QLQDTIYQFE HAQGVVKCIT RDIGSQSKSE QLAEALAEQT RIIIVTIQTF PALFDALDKY PKLASGHYAV IADEAHSSQT GSSASKLKQI LGSDAVLGKE GDAEEISAEE LLDAAVAARA PNERISYYAF TATPKAKTLE LFGRVPDPTL PASADNKPEA FHLYSMRQAI EEGFILDVLQ NYTTYSTAWK IAHPDGDDEE VDSKKARMKL ARWVRLHPYN INQKVEVIVG HFRANIRHLL GGQAKAMVVT SSRQEAVRYQ LAVQAYVKQM GYTDVHPLVA FSGSVLPDGV IPEEVTESSS LLNPGLNGRD LAEAFDTQDF NVMIAANKYQ TGFDQPKLCA MYVDKKLQGV DCVQTLSRLN RTFGDSKPTF ILDFFNDPQD ILDAFLPYYT KAELTDVTDP QLIYDLQKKL DAEGIYHWEE VAAFALAFFD PKAAASKLSY YCAPAKERFA KRYKLAQESR QHALDFKRTA EQNGDSAGVK KAEAAVKEAG EQVDQLDLFK KNLQSFVRLY EFLSQIIPYE DRELEQLCVY AKHLHPLLRV DRLDQEDVDV GELQLTHYRL TKRAEHQLRL SEEQGDYGLK PPTGLGSGKP HDPEKKRLSE IIEALNDIFG AEVSDEDQLQ FLTGIANRIS RQEDVMAQVN NHSVEQVMHG LFPKRVLDTV LDAMTDNEKM SLEVLDNETK SRAFALVILK MLTAAGGLGQ GISGAAV
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