Gene PP_5398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5398 
Symbol 
ID1046068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6154860 
End bp6155180 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content56% 
IMG OID637148796 
ProductISPpu14, transposase Orf1 
Protein accessionNP_747498 
Protein GI26992073 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.180898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00224199 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCAAC GAAGCTCTTA TCCGAAACCG TTCAAAGCCC AGGTCGTTCA GGAATGCCTG 
CAACCTGGCG CAACCGTGTC CAGTGTCGCC ATCAGCCACG GCATCAATGC CAACGTCATC
CGCAAATGGC TGCCGCTTTA TCGAGATCAG CCTGCAGCAG CTTCAATACC GGCATTCGTC
CCACTAAAAA CCGCGCCTAA ACGGCCAGTC GAAGCGTCAG TGATCATCGA GTTGCCTATG
ACCGGGCAAG TGATCACGGT GAAATGGCCA ACCTCAGATC CTGAGGGCTG CGCGCAATTT
ATCCGGGCTG TCGCTCAATG A
 
Protein sequence
MRQRSSYPKP FKAQVVQECL QPGATVSSVA ISHGINANVI RKWLPLYRDQ PAAASIPAFV 
PLKTAPKRPV EASVIIELPM TGQVITVKWP TSDPEGCAQF IRAVAQ