Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5389 |
Symbol | |
ID | 1042037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6144770 |
End bp | 6145429 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637148788 |
Product | hypothetical protein |
Protein accession | NP_747490 |
Protein GI | 26992065 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0460462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCATG GTGAAAGCGC GTATGGCCTC TGGTCGCTGG TTTTCATCAA CTCCGCGATC TTCATCATGT TTGCCTTCAG TTTCTTCAAG CCGGCAACGG CGAGAGACTG GAGGAGCTTC GGTGCCTTCT CGGCGTTCAT CGTTGCCCTG TTTGTGGAAA TGTATGGCTT CCCCCTGACG ATCTATCTGT TGTCAGGCTG GTTGCAGGCC AGGTTCCCCA ACCTCGATCT GCTTTCCCAC GAATCCGGCC ATCTGTGGTC GACGTTGCTC GGTGACCAGG GCAACCCACA CTTCAGTGTT TTGCACATTG CCAGCTACCT ATTCCTGGGT TTCGGCTTCT ATTTGCTTTC TGCCGCCTGG AACGTGCTAT ATCACGCGCA ACGCCGCCAT TCACTTGCAA CGGTCGGGCC CTATGGCTGG ATCAGACATC CGCAGTACGT GGCATTTGTG CTGATTCTTC TGGGTTTTCT CCTTCAGTGG CCGACGCTGC TGACGCTTGC AATGTTCCCG GTGTTGCTGG TGATGTACGG GCGTTTGGCG GTTTCCGAAG AGCGGGAAAT GCACAAGCAG TTTGGCGCTG CCTACGAAGC TTATACCCGC GTTACGCCTA GGTTCGTTCC GCACCTGCGC GAAAGATTGG GTGGGGGTCA TAGAGGCTAA
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Protein sequence | MNHGESAYGL WSLVFINSAI FIMFAFSFFK PATARDWRSF GAFSAFIVAL FVEMYGFPLT IYLLSGWLQA RFPNLDLLSH ESGHLWSTLL GDQGNPHFSV LHIASYLFLG FGFYLLSAAW NVLYHAQRRH SLATVGPYGW IRHPQYVAFV LILLGFLLQW PTLLTLAMFP VLLVMYGRLA VSEEREMHKQ FGAAYEAYTR VTPRFVPHLR ERLGGGHRG
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