Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5331 |
Symbol | |
ID | 1042164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6079578 |
End bp | 6079976 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148730 |
Product | thioesterase superfamily protein |
Protein accession | NP_747432 |
Protein GI | 26992007 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.941741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00374336 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGAGC TCGAACAAGA AGATCCAATC CCGCAAGGCG ACCTGGCCTT GCAAATCACC GCATTGCCGC GAGAAACCAA CGGGTTTGGC GATATTTTCG GCGGTTGGCT GGTTGCGCAG ATGGACCTGG CAGGCACGGC CATGGCCAGC CGTGTCGCCG GCGGCCGCGT AGCCACCGTC GCCATCGACC GCATGGCCTT CCTGGTACCC GTCGCGGTCG GCGCACAGCT GTCTTTCTAT ACCCAGACCC TGGAAATCGG CCGCAGCTCG ATCCAGATGA TGGTCGAGGT GTGGAGCGAC GACCCGCTGT CCAGCGAATG GCGCAAGGTC ACCGAAGCGG TATTCGTCTT CGTCGCCATC GACGGCAGTG GTCGTACCCG CTCGGTGCCT CGTCGCTGA
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Protein sequence | MIELEQEDPI PQGDLALQIT ALPRETNGFG DIFGGWLVAQ MDLAGTAMAS RVAGGRVATV AIDRMAFLVP VAVGAQLSFY TQTLEIGRSS IQMMVEVWSD DPLSSEWRKV TEAVFVFVAI DGSGRTRSVP RR
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