Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5317 |
Symbol | |
ID | 1042185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6063103 |
End bp | 6063660 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148716 |
Product | chorismate lyase |
Protein accession | NP_747418 |
Protein GI | 26991993 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0226154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTACG AATCCCCGCA AGCAGCCGCT GTCGCGTGGC TGCCGTATTC ACAGCTGGCG ACCGACATCG ACCAGCCCAC CCTTGACTGG CTGTTCGACG AGGGCTCGCT GACCCGCCGC CTGACCCGTC TGTCCATTGA TCACTTTTCC GTCACCCCGT TGTTCGAGGG CTGGCAGCCG CTGCGCGATG ACGAATGCCA GGCGCTGGGC ATCGCTGCCG GCGCCGAAGG CTGGGTGCGC GAAGTGTATC TGCGCGGCCA TGGCCAACCT TGGGTATTCG CCCGCAGCGT GGCCAGCCGC AGCGCCCTGG AACGTGGTGG CCTGGACCTG GAAACCTTGG GCAGCCGCTC GCTGGGCGAG CTGCTGTTCT GCGACCAGGC GTTCATCCGT CATCCACTCG AAGTGTGCAC TTATCCACAG GCCTGGCTGC CGTCCGAAGC TGCACATGCG GCGCTTTGGG GCCGCCGCTC GCGCTTCGAG CGCAACGGCC TGGACCTGCT GGTGGCAGAA GTGTTCCTGC CGGCATTGTG GCAAGCGGCC AAGGAGGAAA ACCGCTGA
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Protein sequence | MSYESPQAAA VAWLPYSQLA TDIDQPTLDW LFDEGSLTRR LTRLSIDHFS VTPLFEGWQP LRDDECQALG IAAGAEGWVR EVYLRGHGQP WVFARSVASR SALERGGLDL ETLGSRSLGE LLFCDQAFIR HPLEVCTYPQ AWLPSEAAHA ALWGRRSRFE RNGLDLLVAE VFLPALWQAA KEENR
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