Gene PP_5310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5310 
SymbolrecG 
ID1042195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6056795 
End bp6058873 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content66% 
IMG OID637148709 
ProductATP-dependent DNA helicase RecG 
Protein accessionNP_747411 
Protein GI26991986 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0627539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC TGTCGAAGGT CCCGGTCACA GTACTGAAAG GTGTGGGCGA GGCGATGGCG 
GAGAAACTCG CCAAGGTCGG CCTGGAAAAC CTGCAGGACG TGTTGTTCCA CCTGCCCCTG
CGCTACCAGG ACCGCACGCG CGTGGTGCCA ATCGGCCAGC TGCGTCCCGG CCAGGATGCG
GTTATCGAGG GAGTGGTCAG TGGTGCCGAT GTGACCATGG GCAAGCGCCG CAGCCTGGTG
GTGCGCCTGG GCGACGGCAG CGGTGTGCTG ACATTGCGCT TCTACCACTT CAGCAACGCG
CAGAAAGAGG GCCTGAAGCG GGGCACCCAC CTGCGCTGCT ACGGAGAAGC CCGCCCCGGC
GCTTCGGGCC TGGAAATCTA CCACCCGGAG TACCGTGCGC TGAACGGCAA CGAGCCACCA
CCACCGGTGG AGCAGACCCT GACGCCAATT TACCCGTCCA CCGAAGGCCT TACCCAGCAA
CGCCTGCGCC TGTTGTGCCA GCAGAGCCTT GCGCTGCTTG GCCCGCGTAG CCTGCCCGAC
TGGCTGCCTG ACGAACTTGC CCGGGACTAC CAGCTGGCAC CCCTGGACGA AGCCATCCGC
TACCTGCACA ACCCGCCGGC CGACGCTGAC CTCGACGAGC TCGCCGAAGG CCAGCACTGG
GCTCAACACC GCCTGGCCTT CGAAGAGTTG CTGACCCATC AGCTGTCGCA GCAACGCCTG
CGCGAAAGCC TGCGCAGCCT GCGTGCGCCG GTACTGCCCA GGGCCACGCG CCTGCAGGCG
CAATACCTGG CTAACCTGGG CTTCCAGCCG ACCGGCGCGC AGCAGCGGGT AGCCAACGAA
ATTGCCTACG ACCTTAGCCA GCACGAACCG ATGATGCGTC TGGTGCAGGG CGACGTGGGT
GCCGGCAAGA CCGTTGTCGC TGCACTGGCC GCGTTGCAGG CGCTGGAGGC GGGCTACCAG
GTGGCATTGA TGGCACCCAC CGAGATTCTC GCCGAGCAGC ACTACATTAC CTTCAAGCGC
TGGCTGGAAC CGCTGGGCAT CGAAGTCGCC TGGCTAGCCG GTAAACTCAA GGGCAAGGCC
CGGGCCGCCT CCCTGGAGCA GATCGCCAAC GGCGCACCCA TGGTGGTCGG CACCCACGCA
CTGTTCCAGG AAGAGGTAAG GTTCAAGCAC CTGGCCCTTG CGATCATCGA CGAACAGCAC
AGGTTCGGCG TGCAGCAACG CCTGGCCCTG CGCAGGAAGG GCGTGGCCGG CGAGCTGTGC
CCGCACCAAC TGATCATGAC CGCCACGCCT ATTCCGCGCA CCCTGGCCAT GAGCGCCTAC
GCCGACCTGG ACACCTCGGT GCTCGACGAA TTGCCGCCAG GGCGTACGCC GGTGAACACC
GTGCTGGTGG CCGACAGCCG CCGCTTCGAA GTGGTCGAGC GGGTACGCGC CGCCTGCGCC
GAGGGGCGCC AGGCCTATTG GGTATGCACG CTGATCGAAG AGTCCGAAGA ACTCACCTGC
CAGGCCGCCG AAAGCACCTA TGAGGAGCTT GGCAGTGCGC TGGGTGAACT GAAGGTGGGG
TTGATCCATG GGCGCATGAA ACCGGCAGAA AAAGCCGAGA TCATGGCCGA GTTCAAGGCT
GGCAACCTGC AGCTTCTGGT CGCCACCACG GTCATCGAGG TGGGCGTGGA CGTGCCCAAC
GCCAGCCTGA TGATCATCGA GAACCCCGAG CGCCTGGGCC TTGCGCAGTT GCACCAGCTG
CGTGGCAGGG TTGGCCGGGG CAGCGCCGTG AGCCATTGCG TGCTGCTGTA CCACCCGCCG
CTGTCGCAGA TCGGCCGCGA GCGCTTGGGG ATCATGCGAG AGACCAACGA CGGCTTCATC
ATCGCCGAAA AAGACCTTGA ACTGCGTGGC CCGGGCGAGA TGCTCGGCAC CCGCCAGACC
GGTCTGCTGC AGTTCAAGGT CGCCGACCTG ATGCGCGACG CCGACCTGCT GCCGGCCGTG
CGCGACGCGG CCCAGGCTCT GGTATCACGC TGGCCGGAAC ACGTCAGCCC GCTGCTGGAC
CGCTGGCTGC GCCACGGCCA ACAATATGGC CAAGTGTGA
 
Protein sequence
MSELSKVPVT VLKGVGEAMA EKLAKVGLEN LQDVLFHLPL RYQDRTRVVP IGQLRPGQDA 
VIEGVVSGAD VTMGKRRSLV VRLGDGSGVL TLRFYHFSNA QKEGLKRGTH LRCYGEARPG
ASGLEIYHPE YRALNGNEPP PPVEQTLTPI YPSTEGLTQQ RLRLLCQQSL ALLGPRSLPD
WLPDELARDY QLAPLDEAIR YLHNPPADAD LDELAEGQHW AQHRLAFEEL LTHQLSQQRL
RESLRSLRAP VLPRATRLQA QYLANLGFQP TGAQQRVANE IAYDLSQHEP MMRLVQGDVG
AGKTVVAALA ALQALEAGYQ VALMAPTEIL AEQHYITFKR WLEPLGIEVA WLAGKLKGKA
RAASLEQIAN GAPMVVGTHA LFQEEVRFKH LALAIIDEQH RFGVQQRLAL RRKGVAGELC
PHQLIMTATP IPRTLAMSAY ADLDTSVLDE LPPGRTPVNT VLVADSRRFE VVERVRAACA
EGRQAYWVCT LIEESEELTC QAAESTYEEL GSALGELKVG LIHGRMKPAE KAEIMAEFKA
GNLQLLVATT VIEVGVDVPN ASLMIIENPE RLGLAQLHQL RGRVGRGSAV SHCVLLYHPP
LSQIGRERLG IMRETNDGFI IAEKDLELRG PGEMLGTRQT GLLQFKVADL MRDADLLPAV
RDAAQALVSR WPEHVSPLLD RWLRHGQQYG QV