| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5270 |
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| Symbol | dadA-2 |
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| ID | 1042325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6019335 |
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| End bp | 6020639 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148669 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | NP_747371 |
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| Protein GI | 26991946 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0829502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTTC TGGTACTTGG TAGCGGTGTA ATCGGAACCG CCAGTGCCTA CTACCTGGCC
CGGCAAGGTT TCGAAGTCAC GGTGGTCGAC CGCCAGCCGG CGGTGGCCAT GGAAACCAGC
TTTGCCAACG CCGGCCAGAT CTCGCCCGGC TATGCCTCGC CCTGGGCTGC GCCTGGCGTA
CCGCTCAAAG CCATCAAGTG GCTGCTGGAG CGTCACGCCC CCCTGGCCAT CAAGCTCACG
GGCGATGTCG ACCAGTACCT GTGGATGGCA CAGATGCTGC GCAACTGCAC TGCCAGCCGC
TACGCGGTGA ACAAGGAGCG CATGGTGCGC CTGTCCGAGT ACAGCCGTGA CTGCCTCGAC
GAGCTGCGCG CCGAAACCGG CATCAACTAC GAAAACCGCA GCCTGGGCAC CACCCAGCTG
TTCCGCACCC AGGCCCAGGT CGATGCTGCG GCCAAGGACA TTGCCGTACT CGAACAGTCC
GGTGTGCCCT ACGAGCTGCT CGACCGCGAC GGCATTGCCC GCGTCGAACC CGCCCTGGCC
GGCGTGAAAG ATATCCTGGC CGGCGCCCTG CGCCTGCCGA ACGACCAGAC TGGCGACTGC
CAGCTGTTTA CCACCAAGCT TGCCGACATG GCGTTGAAGC TGGGCGTGGA GTTCCGCTTC
GGCCAGGACA TCCAGCGCCT GGACTTCGCG GGTGACCGCA TCAATGGCGT GTGGATCGAC
GGCAAGCTGG AAACGGCAGA CCGCTACGTG CTGGCGCTGG GCAGCTACTC GCCACAGATG
CTCAAGCCGC TGGGCATCAA GGCTCCGGTG TATCCGCTGA AAGGCTATTC GCTGACCGTG
CCGATCACCA ACAGCGACAT GGCCCCGACT TCGACCATTC TCGACGAGAC CTACAAGGTT
GCCATCACCC GTTTCGACAA CCGCATCCGC GTTGGGGGCA TGGCTGAAAT CGCTGGTTTT
GACCTGTCGC TGAACCCGCG TCGGCGCGAA ACGCTGGAGA TGATCGTCAA CGACCTTTAT
CCTCGCGGCG GTGACCTGAG CCAGGCCAGC TTCTGGACCG GCTTGCGCCC GGCGACCCCG
GACGGCACAC CGATCGTGGG TGCCACGGCG TTCCGCAACC TGTTCCTGAA CACCGGTCAC
GGTACCTTGG GCTGGACCAT GGCGTGCGGT TCCGGCCGCC TGCTGGCCGA CCTGATTGCG
CGCAAGAAGC CGCAGATCAG TGCCGAAGGC CTGGATATCT CCCGTTATGG CAATAGCCGG
GAAGTGGCCA AGCACGGGCA AAGCGCGCCG GCTCACCAGC AGTAA
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| Protein sequence | MRVLVLGSGV IGTASAYYLA RQGFEVTVVD RQPAVAMETS FANAGQISPG YASPWAAPGV
PLKAIKWLLE RHAPLAIKLT GDVDQYLWMA QMLRNCTASR YAVNKERMVR LSEYSRDCLD
ELRAETGINY ENRSLGTTQL FRTQAQVDAA AKDIAVLEQS GVPYELLDRD GIARVEPALA
GVKDILAGAL RLPNDQTGDC QLFTTKLADM ALKLGVEFRF GQDIQRLDFA GDRINGVWID
GKLETADRYV LALGSYSPQM LKPLGIKAPV YPLKGYSLTV PITNSDMAPT STILDETYKV
AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVNDLY PRGGDLSQAS FWTGLRPATP
DGTPIVGATA FRNLFLNTGH GTLGWTMACG SGRLLADLIA RKKPQISAEG LDISRYGNSR
EVAKHGQSAP AHQQ
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