Gene PP_5255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5255 
Symbol 
ID1042311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5998507 
End bp5999136 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content61% 
IMG OID637148654 
Productisochorismatase superfamily hydrolase 
Protein accessionNP_747356 
Protein GI26991931 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACT TCAAATACAA CCGCCTGAAC AAAGACGACG CCGCTGTACT GCTGGTTGAC 
CACCAGGCGG GCCTGCTGTC CCTGGTGCGG GACATCGAGC CGGACGCGTT CAAGAACAAC
GTGCTGGCCC TGGCCGACCT GGCCAAGTTC TTCAACCTGC CGACCATTCT TACCACCAGC
TTCGAGCAAG GCCCCAACGG CCCACTGGTG CCAGAACTGA AAGCCCTGTT CCCGGACGCC
CCGTACATTG CCCGCCCTGG CCAGATCAAC GCCTGGGACA ACGAAGACTT CGTCAAGGCA
GTGAAGGCCA CTGGCAAGAA GCAACTGATC ATCGCCGGCG TTGTGACTGA AGTGTGCGTA
GCTTTCCCGG CCCTGTCGGC CCTGGAAGAA GAGTTCGACG TGTTCGTGGT CACTGATGCC
TCCGGTACCT TCAACGCCAT GACCCGCGAC GCCGCCCACG ACCGCATGAG CCAGGCAGGT
GCGCAACTGA TGACCTGGTT CGGCGTGGCC TGTGAGCTGC ACCGCGACTG GCGCAACGAC
ATCGAAGGCC TGGCCGCGCT GTGCTCCAAC CACATCCCGG ACTACCGCAA CCTGATGACC
AGCTACAACG CCTTCAACGC CAACAAGTAA
 
Protein sequence
MTHFKYNRLN KDDAAVLLVD HQAGLLSLVR DIEPDAFKNN VLALADLAKF FNLPTILTTS 
FEQGPNGPLV PELKALFPDA PYIARPGQIN AWDNEDFVKA VKATGKKQLI IAGVVTEVCV
AFPALSALEE EFDVFVVTDA SGTFNAMTRD AAHDRMSQAG AQLMTWFGVA CELHRDWRND
IEGLAALCSN HIPDYRNLMT SYNAFNANK