Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5255 |
Symbol | |
ID | 1042311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5998507 |
End bp | 5999136 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637148654 |
Product | isochorismatase superfamily hydrolase |
Protein accession | NP_747356 |
Protein GI | 26991931 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCACT TCAAATACAA CCGCCTGAAC AAAGACGACG CCGCTGTACT GCTGGTTGAC CACCAGGCGG GCCTGCTGTC CCTGGTGCGG GACATCGAGC CGGACGCGTT CAAGAACAAC GTGCTGGCCC TGGCCGACCT GGCCAAGTTC TTCAACCTGC CGACCATTCT TACCACCAGC TTCGAGCAAG GCCCCAACGG CCCACTGGTG CCAGAACTGA AAGCCCTGTT CCCGGACGCC CCGTACATTG CCCGCCCTGG CCAGATCAAC GCCTGGGACA ACGAAGACTT CGTCAAGGCA GTGAAGGCCA CTGGCAAGAA GCAACTGATC ATCGCCGGCG TTGTGACTGA AGTGTGCGTA GCTTTCCCGG CCCTGTCGGC CCTGGAAGAA GAGTTCGACG TGTTCGTGGT CACTGATGCC TCCGGTACCT TCAACGCCAT GACCCGCGAC GCCGCCCACG ACCGCATGAG CCAGGCAGGT GCGCAACTGA TGACCTGGTT CGGCGTGGCC TGTGAGCTGC ACCGCGACTG GCGCAACGAC ATCGAAGGCC TGGCCGCGCT GTGCTCCAAC CACATCCCGG ACTACCGCAA CCTGATGACC AGCTACAACG CCTTCAACGC CAACAAGTAA
|
Protein sequence | MTHFKYNRLN KDDAAVLLVD HQAGLLSLVR DIEPDAFKNN VLALADLAKF FNLPTILTTS FEQGPNGPLV PELKALFPDA PYIARPGQIN AWDNEDFVKA VKATGKKQLI IAGVVTEVCV AFPALSALEE EFDVFVVTDA SGTFNAMTRD AAHDRMSQAG AQLMTWFGVA CELHRDWRND IEGLAALCSN HIPDYRNLMT SYNAFNANK
|
| |