Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5171 |
Symbol | cysP |
ID | 1042535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5896351 |
End bp | 5897379 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637148570 |
Product | sulfate ABC transporter, periplasmic sulfate-binding protein |
Protein accession | NP_747272 |
Protein GI | 26991847 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.138843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATCG GGAGCTTCAC CATGTCCATC CGCCGTTATG CGCTCGCCGC CCTGGCCAGT GCTGTTTTTG CCGGTTCCGC CATCGCCAAG GACTACGAAC TGCTCAACGT GTCCTATGAC CCGACCCGTG AGCTGTACCA GCAGTACAAC GCCGAGTTCA TCAAACACTG GCAACAGGCC CACCCGGGTG ACAAGGTGAA AATCCAGCAA TCCCATGGGG GGTCGGGCAA GCAGGCCCGT GCGGTGATCG ACGGCCTGCG CGCCGACGTG GTGACCCTGG CCCTGGCCGG TGACATCGAC GAAGTGGCCA AGCTTGGCAA GACCCTGCCC GAGAACTGGC AGACCCGCCT GCCTGACGCC AGCACCCCGT ACACCTCGAC CATCGTGTTC CTGGTGCGCA AGGGCAACCC GAAAGGCATC AAGGACTGGG GCGACCTGAT CAAGAAGGAC GTGTCGGTCA TCACCCCGAA CCCGAAAACC TCCGGCGGTG CGCGCTGGAA CTTCCTCGCA GCGTGGGCGT ACGGCCTGAA GGTTGGCGGT AGCGAAGAGA AGGCCAAGGC CTATGTGCAG GAGCTGTTCA AGCATGTACC GGTGCTGGAT ACCGGCGCCC GTGGTTCGAC CATCACCTTC GTCAACAATG GCCAGGGCGA CGTGTTGCTG GCCTGGGAAA ACGAAGCCTT CCTGGCCCTG AAGGAAGACG GTGGTGCCAA CAAGTTCGAG ATCGTCGTGC CGTCGCTGTC GATCCTGGCC GAGCCGCCAG TGGCCGTGGT CGACAAGAAC GCCGAGAAGA AGGGCAATAC CGAGATTGCC ATCGAATACC TCAAGCACCT GTACAGCCCG GCCGGGCAGA AGATTGCCGC CGAGAACTTC TACCGCCCGC GTGACGAGAA AGTCGCTGCG CAGTTCGGCA AGCAGTTCCC GAAACTGGAC CTGGTGACCA TCGACAAGGA CTTTGGTGGG TGGAAGACTG CACAACCGAA ATTCTTCAAT GATGGCGGTG TGTTCGACCA GATCTATCAG GCACAGTAA
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Protein sequence | MPIGSFTMSI RRYALAALAS AVFAGSAIAK DYELLNVSYD PTRELYQQYN AEFIKHWQQA HPGDKVKIQQ SHGGSGKQAR AVIDGLRADV VTLALAGDID EVAKLGKTLP ENWQTRLPDA STPYTSTIVF LVRKGNPKGI KDWGDLIKKD VSVITPNPKT SGGARWNFLA AWAYGLKVGG SEEKAKAYVQ ELFKHVPVLD TGARGSTITF VNNGQGDVLL AWENEAFLAL KEDGGANKFE IVVPSLSILA EPPVAVVDKN AEKKGNTEIA IEYLKHLYSP AGQKIAAENF YRPRDEKVAA QFGKQFPKLD LVTIDKDFGG WKTAQPKFFN DGGVFDQIYQ AQ
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