Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5139 |
Symbol | cadA-2 |
ID | 1041793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5863889 |
End bp | 5866141 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148538 |
Product | heavy metal translocating P-type ATPase |
Protein accession | NP_747240 |
Protein GI | 26991815 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.921896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAGC CTGTCAGCCA CGAACACAAG CATCCGCACG ATCACGCTCA TGGTGATGAC GACCATGGCC ATGCTGCCCA CGGCCACAGC TGCTGCGGCG CCAAAGCCGC GCCGCCGCTG GTGCAACTGA GCGAAACGGC CAGTGCCCAG GCACAACTCA GTCGTTTCCG CATCGAGGCC ATGGACTGCC CCACCGAGCA GACCCTGATC CAGGACAAAC TGAGCAAGCT GGCCGGTATC GAACAGCTGG AATTCAACCT GATCAACCGC GTGCTTGGCG TGCGCCACAC CCTGGACGGC ACCGCCGATA TCGAGCGGGC GATCGACAGC CTGGGCATGA AGGCCGAGCC GATAGCGGCC CAGGACGACG GCAGTGCCAG CGTGCCACAA CCGGCCAAGG CCCACTGGTG GCCACTGGCA TTGTCGGGCG TCGCCGCGAT CGCCGCCGAA ATCGTGCACT TTGCTGCACT GGCCCCTGAG TGGGTGGTGG CGGGGCTGGC GCTTGCCGCG ATCCTCGGTT GCGGCCTGGG TACCTACAAG AAGGGCTGGA TTGCCCTGAA AAACCGGAAC CTCAACATCA ATGCGCTGAT GAGTATCGCC GTGACGGGGG CCGTATTGAT CGGCCAGTGG CCGGAAGCGG CTATGGTGAT GGTGCTGTTC ACCGTTGCCG AACTGATCGA AGCGCGCTCG CTGGACCGTG CGCGCAATGC CATTGGCGGG TTGATGCAGC TGACCCCGGA CATGGCCACG GTGCAGCAGG CCGATGGCCA GTGGCGCGAG CTGGACGTGC GTGAGGTGGC CATCGGCGCA CTGGTGCGGG TGCGCCCCGG TGAGCGCATC GGACTGGACG GTGAAGTGAC CCGCGGGCAA TCCAGCGTCG ATCAGGCGCC GATTACCGGT GAAAGCCTGC CTGTGGAGAA GGGGGTGGGT GACAAGCTGT TCGCTGGCAC CATCAACCAG GCGGGGGCGC TGGAGTTTCG CGTCACCGCC GCTGCCGGGC AGTCGACCCT GGCGCGGATC ATCAAGGCGG TGGAGGAAGC GCAAGGCGCG CGGGCGCCTA CCCAGCGCTT TGTCGACCGT TTTTCGCGCA TCTACACCCC GGTGGTGTTC GCCATCGCCT TGGCCGTGGC GCTGATACCA CCGCTGTTCC TGGCTGGCGC CTGGTTCGAC TGGGTTTACC GCGCCTTGGT GCTGCTGGTG GTGGCCTGCC CGTGCGCGCT GGTGATCTCG ACCCCGGTGA CCATCGTCAG TGGCCTGGCC GCCGCCGCGC GCAAAGGCAT CCTGATCAAG GGTGGCGTGT ACCTGGAGGG TGGCCGCCAC CTTGATTTCC TGGCCCTGGA CAAGACCGGC ACCATCACCC ATGGCAAGCC GGTGCAGACC GACGCCAAGG TGCTGGCGCC GCTGTTCGAA GACCGTGCGC AAGCCTTGGC GGCCAGCCTG GGCGAGCGTT CGGACCACCC GGTGTCCCGC GCCATTGCCG AGTTCGGCAA GCAGCAAGGC CTGGCCTTGA GCGAGGTCAG TGACTTCGTT GCGCTGGCCG GGCGTGGCGT GCGTGGCGTC ATTGCCGGTG AGGTCTACCA CTTGGGCAAC CACCGCCTGG TCGAGGAGCT GGGGCTGTGT TCGCCAGCGC TGGAGGCCCA ACTGGATGCG CTGGAGCGCC AGGGCAAGAC CGTGGTCCTG CTGCTTGACC GCTCCGGGCC ACTGGCACTG TTCGCCGTGG CCGACACGGT CAAGGACAGC AGCCGTCAGG CGATCGCCGA ATTGCATCAG CTGGGTATCA AGACTGTCAT GCTGACCGGT GACAATCCGC ATACTGCGCA GGCCATTGCT GCCGTGGTGG GAATCGACCG CGCCGAGGGC AACCTGTTGC CGGCCGACAA GCTGAAAACC ATTGAGGCGT TGTACGCACA AGGCCATCGG GTGGGCATGG TCGGTGACGG CATCAACGAC GCCCCGGCGC TGGCCCGCGC CGAAATCGGT TTTGCCATGG CTGCTGCCGG CACCGACACC GCCATCGAGA CGGCCGATGT GGCGCTGATG GACGATGACT TGCGCAAAAT CCCGGCCTTC GTCAGGCTGT CGCGCCAAAG TGCGGCGATC CTCATGCAGA ACATCGTGCT GGCGTTGGGC ATCAAGGCGA TATTTCTGGC GATCACCTTC GCCGGCATGG CCACGATGTG GATGGCGGTG TTCGCTGATA TGGGCGTGAG CTTGCTGGTG GTGTTCAACG GCTTGCGCCT TTTGCGCAAA TAG
|
Protein sequence | MNQPVSHEHK HPHDHAHGDD DHGHAAHGHS CCGAKAAPPL VQLSETASAQ AQLSRFRIEA MDCPTEQTLI QDKLSKLAGI EQLEFNLINR VLGVRHTLDG TADIERAIDS LGMKAEPIAA QDDGSASVPQ PAKAHWWPLA LSGVAAIAAE IVHFAALAPE WVVAGLALAA ILGCGLGTYK KGWIALKNRN LNINALMSIA VTGAVLIGQW PEAAMVMVLF TVAELIEARS LDRARNAIGG LMQLTPDMAT VQQADGQWRE LDVREVAIGA LVRVRPGERI GLDGEVTRGQ SSVDQAPITG ESLPVEKGVG DKLFAGTINQ AGALEFRVTA AAGQSTLARI IKAVEEAQGA RAPTQRFVDR FSRIYTPVVF AIALAVALIP PLFLAGAWFD WVYRALVLLV VACPCALVIS TPVTIVSGLA AAARKGILIK GGVYLEGGRH LDFLALDKTG TITHGKPVQT DAKVLAPLFE DRAQALAASL GERSDHPVSR AIAEFGKQQG LALSEVSDFV ALAGRGVRGV IAGEVYHLGN HRLVEELGLC SPALEAQLDA LERQGKTVVL LLDRSGPLAL FAVADTVKDS SRQAIAELHQ LGIKTVMLTG DNPHTAQAIA AVVGIDRAEG NLLPADKLKT IEALYAQGHR VGMVGDGIND APALARAEIG FAMAAAGTDT AIETADVALM DDDLRKIPAF VRLSRQSAAI LMQNIVLALG IKAIFLAITF AGMATMWMAV FADMGVSLLV VFNGLRLLRK
|
| |