Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5138 |
Symbol | |
ID | 1042547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5863010 |
End bp | 5863879 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637148537 |
Product | LysR family transcriptional regulator |
Protein accession | NP_747239 |
Protein GI | 26991814 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGTT CCGAGCTGAA GGCCTTCTAC ATGGTGGCCC GTCTGGGCAG CATCACCCAG GCGGCGAAGA AGCTTGGCCT CAGCCAGCCC ACGGTGACCA CGCAGATCCG CAGCCTGGAA GGCCAGTACG CCGTGGAGCT GTTCTACCGC GGCGGGCGGC GCCTGGTGTT GAGCGAGGAG GGCTTACGCC TGCTGCCGAT GGTCAAGGCG CTGCTGCAGC AGGAAGCCGA CATCGAGTTC GAGCTGCGCA ACAGTGGCCA GGCCCAGGGC AGCCTGCGCA TTGCTGCCAC TGCGCCTTAC TACATTCTCG ACCTGGTCAA GATCTATCGC GAACGCCTGC CGCAGGTTGA AGTGGCGGTG GAGATCGGCA ACTCGCAGCA GGTGCTGGAA ATGCTCGAGG ATTACCGGGT GGACATTGCC GCGTCGTCGC AATGGGTGGA GGACGCACGG TTGGTGCGGC GGATACTGGG CACTGACCCT TTGGTGGTGG CGGTGCACCG CAACCATCCG CTGGCCCATC GCCAGACGGT GTCGATCGAG GTGGTGTCGG GGCATTGCCT GCTGATGCGG GAGAAGGGCT CGACCACACG CAAGCTGACC GAGCAGATGA TGCAGGAGGC TGGGGTCAAG GCCAGCGCCA TGATGGAAAT CGGCAGCCGC GAGTCGATCC GCGAAGCGGT GCTGCGCAAT ATCGGCATCA GCGTGATTGC CCGCCATGAG GTGCCGCACA ATCCCGAACT CCGGGTGCTG GCGCTGGAAA ATGCGCCGGT GATGCATGAG TACCTGTATT GCCTGAAGGA GCGGCGCCAG GCCCGGTTGC CGGCGGCATT CCTGGGGGTG GCGCAGGAAG TGGCCGGTTC GCAGTTCTAG
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Protein sequence | MLSSELKAFY MVARLGSITQ AAKKLGLSQP TVTTQIRSLE GQYAVELFYR GGRRLVLSEE GLRLLPMVKA LLQQEADIEF ELRNSGQAQG SLRIAATAPY YILDLVKIYR ERLPQVEVAV EIGNSQQVLE MLEDYRVDIA ASSQWVEDAR LVRRILGTDP LVVAVHRNHP LAHRQTVSIE VVSGHCLLMR EKGSTTRKLT EQMMQEAGVK ASAMMEIGSR ESIREAVLRN IGISVIARHE VPHNPELRVL ALENAPVMHE YLYCLKERRQ ARLPAAFLGV AQEVAGSQF
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