Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5118 |
Symbol | |
ID | 1042662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5839717 |
End bp | 5840571 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637148517 |
Product | rhodanese domain protein |
Protein accession | NP_747219 |
Protein GI | 26991794 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTG CGCAATTGAT CACCCCGCAG CAGTTGGCCG AGCGTCTGGG CTCGCCCAAG TTGGTGATCC TCGACTGCCG CTTTGCCCTC GAGGATGTGG ACTATGGCCA GCGCAGCTAT GCCCTGGGGC ATATTGAGGG GGCGCATTTT GCCGACCTGG ACCGGGATCT CAGCGGTCCG GTGAGCAAGG GGCGCACCGG GCGCCACCCA TTGCCCGATC CGCAGCGGCT GGTCGAGCGC CTGCGAGAGT GGGGCCTGAA CAACGACAGC GAGGTGGTGC TGTACGACGA CGGCCCCGGC GCCTTTGCCG CCCGCGCCTG GTGGCTACTG GTCTGGCTGG GCAAGCGCAG TGGTGTGGCG ATTCTCGACG GTGGCCTGAA GGCCTGGCAC GCAGCGAGCC TGCCGTTGAG CCTGGACCCT CCACCCAAAC GTGAGGGCAC TTTCAGTGGT GAACCTGACG CGAAGCTGCT GATCGATGCC GACCATCTGG GCAAGCGCCT TGGTAGTGCA GATCTGACCT TGATCGATGC GCGTGCCTTG CCGCGTTTTC GTGGTGAAGT GGAACCGATC GACCCGGTGG CGGGGCATAT TCCCGGTGCC CAGTGTGCGG CGTTTACCGA CAACCTGGGG GATGACGGGC GTTTTCTGCC GGCGGATGAG CTAAAGCAGC GTTTTGCCGA AAAGCTGGCT GGACGGGCGC CGGAGCAGTT GGTGTCTTAT TGTGGGTCTG GGGTAACCGC TTGCCATAAC CTGTTTGCGC TGGCGCTGGC GGGGTACCCG CTGGGCAAGC TGTATGCGGG GTCGTGGAGT GAGTGGATCA ACAACCCGCA GCATGCGGTG GCCACCGGCG AGTAA
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Protein sequence | MPLAQLITPQ QLAERLGSPK LVILDCRFAL EDVDYGQRSY ALGHIEGAHF ADLDRDLSGP VSKGRTGRHP LPDPQRLVER LREWGLNNDS EVVLYDDGPG AFAARAWWLL VWLGKRSGVA ILDGGLKAWH AASLPLSLDP PPKREGTFSG EPDAKLLIDA DHLGKRLGSA DLTLIDARAL PRFRGEVEPI DPVAGHIPGA QCAAFTDNLG DDGRFLPADE LKQRFAEKLA GRAPEQLVSY CGSGVTACHN LFALALAGYP LGKLYAGSWS EWINNPQHAV ATGE
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