Gene PP_5107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5107 
SymbolmtgA 
ID1041810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5827079 
End bp5827789 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID637148506 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionNP_747208 
Protein GI26991783 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.561466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCAA CGCTTATCCG TCGCCTCTCC CGCGCCCTGC TCTGGTTCGT TGCCGGCAGC 
ATCGTGCTGG TGCTGGTGTT CCGCTGGGTA CCACCGCCCG GCACGGCGCT GATGGTCGAG
CGCAAGGTAC AGTCATGGGT GAATGGTGAA CCGATCGACC TGCAGCGCGA CTGGGAGCCA
TGGGAGAACA TCTCCGATGA GCTCAAGGTT GCAGTCATTG CTGGCGAGGA CCAGAAGTTC
GCCAGCCACT GGGGCTTCGA CCTCCCGGCC ATTCAGGCGG CGCTGGCCCA CAACGAGCGT
GGCGGCAACA TTCGCGGCGC CAGCACCCTG ACCCAACAAG TGGCCAAGAA CCTGTTTCTG
TGGTCAGGCC GCAGCTGGTT TCGCAAGGGG CTGGAGGCCT GGTTCACCGC ACTGATCGAG
CTGTTCTGGT CGAAGGAACG GATTCTCGAG GTCTATTTGA ACAGCGCCGA GTGGGGCAAG
GGCGTGTTTG GTGCCCAGGC AGCGGCGCGT TATCACTTTG GCGTCGACGC CAGCCGGCTC
AGCCGCCAGC AGGCAGCGCA GCTGGCAGCG GTGCTGCCAA GCCCAATCAA GTGGAGTGCC
AGCCGACCGA GTGCCTACGT GGCCAGCCGG GCCGGCTGGA TTCGCCGGCA GATGAGCCAG
CTGGGCGGGC CCAGCTACCT GATGCAGCTG GACTCCTCCA GAAAGCTTTG A
 
Protein sequence
MLSTLIRRLS RALLWFVAGS IVLVLVFRWV PPPGTALMVE RKVQSWVNGE PIDLQRDWEP 
WENISDELKV AVIAGEDQKF ASHWGFDLPA IQAALAHNER GGNIRGASTL TQQVAKNLFL
WSGRSWFRKG LEAWFTALIE LFWSKERILE VYLNSAEWGK GVFGAQAAAR YHFGVDASRL
SRQQAAQLAA VLPSPIKWSA SRPSAYVASR AGWIRRQMSQ LGGPSYLMQL DSSRKL