Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5095 |
Symbol | proC-2 |
ID | 1042622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5818723 |
End bp | 5819541 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148494 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | NP_747196 |
Protein GI | 26991771 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.364055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA CACGTATTGC CTTTATCGGC GCCGGCAACA TGGCCGCCAG CCTGATCGGT GGTCTGCGTG CCCAGGGCCT GGACGCCTCG CAGATCCGCG CCAGCGACCC GGGCGCCGAG ACCCGCAGTC GCATCCAGGC CGAGCACGGC ATTGAAGCCT TCGAGGACAA CGCCCAGGCC ATCGATGGCG CTGACGTCAT CGTGCTGGCG GTCAAGCCAC AAGTCATGAA AACCGTATGT CAGGCACTGC AACCCAACCT GCAGGATGGC CAGCTGATCG TTTCCATCGC CGCCGGCATC ACATGCGCCA GCCTGCAGAG CTGGGTGGGC GCTCGCCCGG TGGTGCGCTG CATGCCCAAC ACCCCGGCAT TGCTGCGCCA AGGCGTGAGC GGCCTGTACG CCACCGCTGA AGTGTCCGGC GAACAGCGTC TGCAGGCCGA ACAACTGCTG TCGGCTGTAG GCACCGCCCT GTGGCTGGAG CAGGAACAGC AACTGGACGC CGTGACAGCT GTGTCCGGCA GTGGCCCGGC GTACTTCTTC CTGCTGATCG AGGCCATGAC CGCGGCAGGC GAAAAACTCG GCCTGCCACG CGAAACGGCC TCCCAACTGA CCTTGCAGAC AGCCCTGGGC GCCGCGCGCA TGGCAGTTGC AAGCGATGTC GATGCCGCTG AACTGCGCCG CCGCGTCACT TCGCCCGCCG GCACCACGGA AGCGGCGATC AAGTCGTTCC AGGCCAGCGG CTTCGAAGCC ATCGTCGAGC AGGCGCTGCA GGCTGCAGCC ACGCGCTCTG CCGAGCTGGC CGAACAACTG GGCAAATAA
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Protein sequence | MSKTRIAFIG AGNMAASLIG GLRAQGLDAS QIRASDPGAE TRSRIQAEHG IEAFEDNAQA IDGADVIVLA VKPQVMKTVC QALQPNLQDG QLIVSIAAGI TCASLQSWVG ARPVVRCMPN TPALLRQGVS GLYATAEVSG EQRLQAEQLL SAVGTALWLE QEQQLDAVTA VSGSGPAYFF LLIEAMTAAG EKLGLPRETA SQLTLQTALG AARMAVASDV DAAELRRRVT SPAGTTEAAI KSFQASGFEA IVEQALQAAA TRSAELAEQL GK
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