Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5089 |
Symbol | argS |
ID | 1041719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5813071 |
End bp | 5814807 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148488 |
Product | arginyl-tRNA synthetase |
Protein accession | NP_747190 |
Protein GI | 26991765 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0018] Arginyl-tRNA synthetase |
TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.257691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGACA CCATTCGCCA GCTGATCCAG CAAGCCCTCA CCCAACTCGT CACCGACGGT GTGCTGCCTG AAGGGCTGTC GCCGGCGATC CAGGTGGAAA ACGCCCGGGA CAAGACCCAC GGCGACTTCG CCAGCAACAT CGCCATGATG CTGGCCAAGC CGGCCGGCAT GAAGCCGCGC GACCTCGCCG AAAAACTGAT CAACGCCCTG CCGGCCAGCG CCGACATCAG CAAGGTCGAG ATTGCAGGCC CCGGCTTCCT CAACTTCTTC CAGAACACCG ACGCCCTGGC CAACCGCCTG GATGCCGCCC TGGCCGACGC CCACCTGGGT GCGCGCAAAG CCGGCCCGGC GCAAAAGGTG GTGATCGACA TGTCGGCACC CAACCTGGCC AAGGAAATGC ACGTCGGCCA CCTGCGCTCG ACCATCATCG GTGACAGCGT TGCGCGCGTG CTGGAGTTCC TGGGCGACAA CGTCATCCGC CAGAACCACG TCGGCGACTG GGGTACCCAG TTCGGCATGC TGATGGCCTA CCTGCAGGAA AACCCGATCA CCAGCGACGA GCTGTCGGAC CTGGAAAACT TCTACCGCGC GGCGAAGAAA CGCTTCGATG AATCGGAAGA GTTCGCCACT CGCGCCCGCG GCCTGGTGGT CAAGCTGCAA GCCGGTGACC CCGAGTGTCT GGCCCTTTGG ACACGCTTCA AGGACATCTC GCTGTCGCAC TGCCAGAAGA CCTACGAGCT GCTCAACGTC AAGCTGACCA TGGCCGACGT GATGGGCGAA AGTGCCTACA ACGACGACTT GGCCAACGTG GTGGCCGACC TCAAGGCCAA GGGCCTGCTG GTCGAAGACC AGGGCGCCCA ATGCGTGTTC CTCGAAGAGT TCAAGAACAG CGACGGCGAC CCCCTGCCGG TGATCGTGCA GAAGGCTGAC GGCGGCTATC TGTACGCCAC CACCGACCTG GCTGCCGTGC GTTACCGCAG CAACGTGTTG AAGGCTGACC GCGCACTGTA CTTCGTCGAC CAGCGCCAGG CCCTGCACTT CAATCAGGTG TTCGAAGTGG CCCGCCGCGC TGGCTTCGTC GGCCACCCGA TGCAAATGGA GCACATGGGC TTCGGCACCA TGAACGGCGC CGACGGCCGC CCGTTCAAGA CCCGTGACGG CGGCACCGTG AAGCTGATCG ACCTGCTCAC CGAGGCCAAG GAGCGCGCCT ACGCGCTGGT CAAGGAAAAG AACCCGAGCC TGGCCGACGA CGAACTGCGC CACATCGGCG AGGTGGTGGG CATTGGCGCG GTGAAATACG CCGACCTGTC CAAGCACCGC ACCAGTGACT ACAGCTTCAA CTTCGAGCTG ATGCTCAACT TCGAAGGCAA CACCGCGCCT TACCTGCTGT ACGCTTACAC CCGCGTAGCC GGCGTGTTCC GCAAGCTGGG CAAAGGCTTT GACGAAGTCG ACGGCAAGAT CGTGCTGCAA GCTGCCCACG AGCAGGACTT GGCCGCACGC CTGGCGCAGT TTGGCGAAAT CCTCAACAAC GTCGCCGAAA AAGGCACGCC GCACGTGCTG TGCAGCTACC TGTACGACTT GGCCGGCCTG TTCTCGAGCT TCTACGAGAA CTGCCCGATC CTCGCTGCCG AAACCCCTTC GCAGCAGCAG AGCCGGCTGC GCCTGGCCGC CCTGACTGGC CGCACCCTCA AACAAGGTCT GGAACTGCTC GGCCTGGAAA CCCTGGAGCG CATGTAA
|
Protein sequence | MKDTIRQLIQ QALTQLVTDG VLPEGLSPAI QVENARDKTH GDFASNIAMM LAKPAGMKPR DLAEKLINAL PASADISKVE IAGPGFLNFF QNTDALANRL DAALADAHLG ARKAGPAQKV VIDMSAPNLA KEMHVGHLRS TIIGDSVARV LEFLGDNVIR QNHVGDWGTQ FGMLMAYLQE NPITSDELSD LENFYRAAKK RFDESEEFAT RARGLVVKLQ AGDPECLALW TRFKDISLSH CQKTYELLNV KLTMADVMGE SAYNDDLANV VADLKAKGLL VEDQGAQCVF LEEFKNSDGD PLPVIVQKAD GGYLYATTDL AAVRYRSNVL KADRALYFVD QRQALHFNQV FEVARRAGFV GHPMQMEHMG FGTMNGADGR PFKTRDGGTV KLIDLLTEAK ERAYALVKEK NPSLADDELR HIGEVVGIGA VKYADLSKHR TSDYSFNFEL MLNFEGNTAP YLLYAYTRVA GVFRKLGKGF DEVDGKIVLQ AAHEQDLAAR LAQFGEILNN VAEKGTPHVL CSYLYDLAGL FSSFYENCPI LAAETPSQQQ SRLRLAALTG RTLKQGLELL GLETLERM
|
| |