Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5087 |
Symbol | rpmE |
ID | 1043893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5810281 |
End bp | 5810496 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637148486 |
Product | 50S ribosomal protein L31 |
Protein accession | NP_747188 |
Protein GI | 161378115 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0254] Ribosomal protein L31 |
TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAG GTATCCACCC GAACTACGAA GTAGTTGCAG TCACCTGCAG CTGCGGTAAC AAGTTCGAAA CTCGTTCGAC CCTGGGCAAC GTCCTGTCGA TCGACGTTTG CAACCTGTGC CACCCGTTCT ACACCGGTAA GCAGAAAGTT CTGGACACCG GTGGTCGCGT ACAGAAGTTC GCCGATCGCT TCGGCATGTT CGGTGCCAAG AAGTAA
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Protein sequence | MKEGIHPNYE VVAVTCSCGN KFETRSTLGN VLSIDVCNLC HPFYTGKQKV LDTGGRVQKF ADRFGMFGAK K
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