Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5045 |
Symbol | thiI |
ID | 1041702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5750099 |
End bp | 5751553 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148444 |
Product | thiamine biosynthesis protein ThiI |
Protein accession | NP_747146 |
Protein GI | 26991721 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.675648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTTA TCGTCAAAGT CTTCCCAGAA ATCACCATCA AAAGCCGGCC GGTGCGCAAG CGCTTCATCC GCCAGCTTGG CAAGAACATC CGCAACGTGC TCAAGGATCT CGACCCTGAG CTCGCGGTCG ATGGTGTCTG GGACAATCTC GAGGTGGTCA CCCGCGTCGA AGACGAAAAA GTCCAGCGCG AGATGATCGA ACGCCTCACC TGCACCCCGG GTATCACCCA CTTCCTGCAG GTAGAGGAAT ACCCGCTGGG TGACTTCGAC GACATCGTCG CCAAGTGCAA GCACCACTTC GGCCACCTGC TGGCCGGCAA GCACTTCGCC GTGCGCTGCA AGCGCGGTGG CCACCATGAC TTCACCTCGA TGGACGTCGA CCGTTACGTC GGCAGCCAAC TGCGTCAGCA GTGTGGCGCC GCCGGGATCG AGCTGAAAAA GCCTGAAGTG CTGGTGCGCA TCGAAATCCG CGACCAGCGC CTGTACGTGA TCCACAACCA GCACAATGGC ATCGGCGGTT ATCCGCTGGG TGCCCTGGAG CAGACTCTGG TGCTGATGTC CGGTGGTTTC GACTCCACCG TTGCGGCCTA CCAGATGATG CGCCGCGGCC TGATGACCCA CTTCTGCTTC TTCAACCTCG GCGGCCGTGC CCACGAGCTG GGCGTAATGG AAGTGGCCCA TTACCTGTGG AAAAAATACG GCAGCAGCCA GCGCGTACTG TTCATCAGCG TGCCGTTCGA AGAAGTGGTT GGCGAGATCC TCAACAAGGT CGACAACAGC TACATGGGCG TGACCCTCAA GCGCATGATG CTGCGCGGCG CCGCCCATAT GGCCGACCGC CTGCAGATTG ACGCGCTGGT GACCGGCGAA GCGATTTCCC AGGTGTCCAG CCAGACCCTG CCGAACCTGT CGATCATCGA CTCGGCCACC GACAAGCTGG TGCTGCGCCC GCTGCTGGCC AGCCACAAGC AGGACATCAT CGACCAGGCC ACCGAAATCG GTACCGCGGA CTTTGCCAAG CACATGCCGG AATACTGCGG CGTGATCTCG GTAAACCCGA CCACCCATGC CAAGCGTCAC CGCATGGAGC ACGAAGAAAA GCAGTTCGAC ATGGCCGTGC TGGAGCGCGC TCTTGAGCGC GCCAAGTTCA TTTCCATCGA TCATGTGATC GATGAGCTGG GCAAGGACAT CGAAATCGAG GAAGTGGCCG AGGCGCTGCC AGGCCAGATC GTCATCGACA TTCGCCACCC CGATGCCCAG GAAGACGAAC CTCTGGTGCT GGAAGGTATC GAAGTCCAGG CCATGCCGTT CTACGCCATC AACAGCAAGT TCAAGCACCT GGACCCCACG CGCCAGTACT TGCTGTATTG CGACAAGGGT GTGATGAGCC GTTTGCACGC ACACCATCTG CTCAGTGAGG GACATGCCAA TGTGCGTGTT TATCGTCCGA CATAA
|
Protein sequence | MKLIVKVFPE ITIKSRPVRK RFIRQLGKNI RNVLKDLDPE LAVDGVWDNL EVVTRVEDEK VQREMIERLT CTPGITHFLQ VEEYPLGDFD DIVAKCKHHF GHLLAGKHFA VRCKRGGHHD FTSMDVDRYV GSQLRQQCGA AGIELKKPEV LVRIEIRDQR LYVIHNQHNG IGGYPLGALE QTLVLMSGGF DSTVAAYQMM RRGLMTHFCF FNLGGRAHEL GVMEVAHYLW KKYGSSQRVL FISVPFEEVV GEILNKVDNS YMGVTLKRMM LRGAAHMADR LQIDALVTGE AISQVSSQTL PNLSIIDSAT DKLVLRPLLA SHKQDIIDQA TEIGTADFAK HMPEYCGVIS VNPTTHAKRH RMEHEEKQFD MAVLERALER AKFISIDHVI DELGKDIEIE EVAEALPGQI VIDIRHPDAQ EDEPLVLEGI EVQAMPFYAI NSKFKHLDPT RQYLLYCDKG VMSRLHAHHL LSEGHANVRV YRPT
|
| |