| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4980 |
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| Symbol | |
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| ID | 1041894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5672752 |
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| End bp | 5674632 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148380 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_747082 |
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| Protein GI | 26991657 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG CTTCCCTCGG TCTCTCCGAG GCTCTTGTCC GCGCTATCGA GGCTGCGGGC
TACACCCAGC CGACCCCCGT GCAACAGCGG GCTATTCCCG CCGTGTTGCA AGGCCGCGAC
CTGATGGTTG CCGCACAGAC AGGTACGGGT AAAACCGGCG GCTTTGCCCT GCCGATTCTC
GAGCGCCTGT TCCCGGCCGG CCATCCCGAC AAATCACAGC GCCACGGCCC GCGCCAGCCT
CGCGTGCTGG TCCTGACGCC GACCCGCGAA CTGGCAGCCC AGGTGCATGA CAGTTTCAAG
GTCTATGCCC GTGACCTGCC ACTGGTCAGC GCCTGCATCT TCGGCGGCGT TGGCATGAAC
CCGCAGATCC AGGCCATTGC CAAAGGCGTT GATGTGCTGG TCGCCTGCCC AGGCCGCCTG
CTCGACCTCG CCGGCCAAGG CAAGGTCGAC CTGGCCCACG TGGAAATCCT GGTACTTGAT
GAAGCCGATC GCATGCTCGA CATGGGCTTC ATCCACGACG TCAAGAAGGT CCTCGCCCGC
CTGCCGGCCA AACGCCAGAA CCTGCTCTTC TCGGCCACCT TCTCCAAGGA CATCACCGAC
CTCGCCGACA AGCTCCTGCA CAACCCGGAG CGTATCGAGG TCACCCCGCC GAACACCACC
GTCGAGCGTA TCGAGCAGCG GGTATATCGC CTGCCTGCCA GCCACAAGCG TGCCTTGCTG
GCGCACCTGA TCACCCTGGG CGCCTGGGAA CAGGTGTTGG TGTTCACCCG AACCAAGCAT
GGCGCCAACC GCCTGGCCGA GTACCTGGAA AAGCAAGGCC TGACCGCCGC CGCGATCCAC
GGCAACAAGA GCCAGAACGC CCGCACCAAG GCGCTGGCCG ACTTCAAGGC CAACAGCGTG
CGCGTACTGG TCGCCACCGA CATCGCTGCC CGCGGCCTGG ACATCGACCA GTTGCCCCAT
GTTGTCAACT TCGAGCTGCC GAATGTCGAG GAAGACTACG TCCACCGCAT CGGCCGTACC
GGCCGTGCCG GTCGTTCGGG CGAAGCTATT TCCCTGGTCG CGCCAGATGA AGAGAAGCTG
CTCAAGAGCA TCGAGCGGGT GACCAAGCAG CGCATCGCGG ATGGCGACCT GATGGGCTTC
GACGCCAGCC AGGTAGAAGC CGAGAAGCCC GAAGCACGCG AGCGCCCGCA GAATAACGGC
CGCGGTGGCC GCAACCAGCA GGCCCGTGGC GAAGGTGGTA AAGACACCAA CGGCGGCCGC
AAGGACAAAG GCAAGGACAA AGGCAAAGCC AGGCAGCAAG CTGCGGCCAA GCCGGACGAC
AAGGAAAAGA GCGGCGACAA GCAGCAACCG CGCAAGCCGC GTGACAAGAA GTCACGCCCG
CAGCAGGCCA GCAATAACAG CGTGCCGAAG CCGCCGGCAG ACCGCGACCC GGAAGAGTTC
CTGGACGACG AACTCGATAA CTTCGGTAAC CGCGCGGACT ATGTCAGCCC TTACCAGGGC
AAGAACCAGG GCCGCAACCG CCGCCCGGGT GGTGCTGGCC AAGGTCAGGG GCAAGGCAAT
GGCCAACGCA GCAACGCTGG CGGCCAGGGC CAAGCCCGCA ATGGCGGCCA GCCACGCAGT
GGTGGCGGAG AAAAACGCCC GCCCCGCGCC AACAACGGTG GCGGTGCCCG TCGTGATGGC
GGCGGTGGCC GTGGTCGCCC TGCGCGTGAC GATGCTGCCC GGCAAGAGCC GGCCGTGCGC
AACCCGCGTC AGCCGGAAAA ACAGCCAGTG ATCATTCGCA AGGAGTCCAA GCTGGACCGT
TTCCCGACGC CTGAGCAACT GGATGACCTG CCAAGCCGCC CACGCGGTGA GCGCCCAGCG
CTGCTGACCC GCAAGGGCTG A
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| Protein sequence | MSFASLGLSE ALVRAIEAAG YTQPTPVQQR AIPAVLQGRD LMVAAQTGTG KTGGFALPIL
ERLFPAGHPD KSQRHGPRQP RVLVLTPTRE LAAQVHDSFK VYARDLPLVS ACIFGGVGMN
PQIQAIAKGV DVLVACPGRL LDLAGQGKVD LAHVEILVLD EADRMLDMGF IHDVKKVLAR
LPAKRQNLLF SATFSKDITD LADKLLHNPE RIEVTPPNTT VERIEQRVYR LPASHKRALL
AHLITLGAWE QVLVFTRTKH GANRLAEYLE KQGLTAAAIH GNKSQNARTK ALADFKANSV
RVLVATDIAA RGLDIDQLPH VVNFELPNVE EDYVHRIGRT GRAGRSGEAI SLVAPDEEKL
LKSIERVTKQ RIADGDLMGF DASQVEAEKP EARERPQNNG RGGRNQQARG EGGKDTNGGR
KDKGKDKGKA RQQAAAKPDD KEKSGDKQQP RKPRDKKSRP QQASNNSVPK PPADRDPEEF
LDDELDNFGN RADYVSPYQG KNQGRNRRPG GAGQGQGQGN GQRSNAGGQG QARNGGQPRS
GGGEKRPPRA NNGGGARRDG GGGRGRPARD DAARQEPAVR NPRQPEKQPV IIRKESKLDR
FPTPEQLDDL PSRPRGERPA LLTRKG
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