Gene PP_4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4960 
Symbolfda 
ID1041723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5651400 
End bp5652464 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content61% 
IMG OID637148361 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionNP_747063 
Protein GI26991638 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA TTAGCATGCG CCAGATGCTG GACCACGCCG CCGAGTTCGG CTACGGCGTA 
CCAGCTTTCA ACGTCAACAA CCTCGAGCAG ATGCGCGCCA TCATGGAAGC GGCCGACAAG
ACCGACTCCC CGGTGATCGT TCAGGCTTCG GCCGGTGCCC GCAAATACGC GGGTGCGCCA
TTCCTGCGCC ACCTGATCCT GGCTGCCATC GAAGAGTTCC CGCACATCCC GGTGTGCATG
CACCAGGACC ACGGTACCAG CCCTGACGTC TGCCAGCGCT CGATCCAGCT GGGCTTCAGC
TCGGTCATGA TGGACGGTTC GCTGGGTGAA GACGGCAAGA CCCCGACCGA CTACGAGTAC
AACGTCCGCG TTACCCAGCA GACCGTTGCC ATGGCTCACG CCTGCGGCGT TTCGGTTGAA
GGCGAACTGG GCTGCCTGGG CTCCCTGGAA ACCGGCATGG CCGGTGAAGA AGACGGGATC
GGCGCCGAAG GCGTGCTGGA TCACAGCCAG ATGCTGACCG ACCCGGAAGA AGCCGCCGAC
TTCGTCAAGA AGACCCAGGT CGACGCCCTG GCGATCGCCA TCGGTACCAG CCACGGTGCC
TACAAGTTCA CCAAGCCACC AACCGGTGAC GTGCTGGCCA TCGATCGTAT CAAGGAAATC
CACAAGCGCA TCCCCAACAC CCACCTGGTG ATGCACGGTT CGTCCTCGGT ACCGCAAGAG
TGGCTGGCGA TCATCAACCA GTACGGCGGC GACATCAAAG AAACCTACGG TGTACCGGTT
GAAGAAATCG TTGAAGGCAT CAAGCACGGC GTGCGCAAGG TCAACATCGA TACCGACCTG
CGTCTGGCCT CTACCGGTGC CATGCGCCGT CTGATGGCGC AGAACCCGAG CGAGTTCGAC
CCACGCAAGT TCTTCGGTGA AACCATCAAG GCCATGCGCG ACGTGTGCAT CGCGCGTTAC
GAAGCCTTCG GCACCGCGGG CAATGCCTCG AAGATCAAGC CGATCTCTCT GGAAGGCATG
TACCAGCGCT ACCTGAAAGG TGAACTGGCC GCCAAGGTCA ACTGA
 
Protein sequence
MALISMRQML DHAAEFGYGV PAFNVNNLEQ MRAIMEAADK TDSPVIVQAS AGARKYAGAP 
FLRHLILAAI EEFPHIPVCM HQDHGTSPDV CQRSIQLGFS SVMMDGSLGE DGKTPTDYEY
NVRVTQQTVA MAHACGVSVE GELGCLGSLE TGMAGEEDGI GAEGVLDHSQ MLTDPEEAAD
FVKKTQVDAL AIAIGTSHGA YKFTKPPTGD VLAIDRIKEI HKRIPNTHLV MHGSSSVPQE
WLAIINQYGG DIKETYGVPV EEIVEGIKHG VRKVNIDTDL RLASTGAMRR LMAQNPSEFD
PRKFFGETIK AMRDVCIARY EAFGTAGNAS KIKPISLEGM YQRYLKGELA AKVN