Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4951 |
Symbol | |
ID | 1043960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5640333 |
End bp | 5641760 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148352 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | NP_747054 |
Protein GI | 26991629 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAC GCACCCCGCT GGACCCCGTC ACCGCCCGCT GGATCCCTTG GGTGGTGGCC ATCGCCTTCT TCATGCAGTC CCTGGACGGC ACCATCCTCA ACACTGCCCT GCCGGCCATG GCCCGCTCGT TGGCCGAAGA CCCCTTGCGC ATGCAGGGTG TGATCATTGC CTACATGCTC ACCGTGGCCC TGCTGATCCC TGCCTCAGGC TGGATCGCCG ACCGATTCGG CACCAAGCGC ATCTTCTTCA GCGCCATCTT GCTGTTCAGC TTTGGCTCGC TGCTGTGCGC TGCAGCCAAC AGCCTTGGCT TCCTGATCTT CGCCCGCGTG GTGCAGGGCC TGGGCGGTGC GCTGATGCTG CCGGTCGGGC GGCTGGTGGT GCTGCGCGCC TACCCACGCA GCGAGCTGGT GCGGATCATG AGTTTCATCA CCATCCCCGG CCTGCTCGGG CCATTGCTGG GCCCAACGGT CGGTGGCTGG CTGGTGGAAA TCCTCAGCTG GCACTGGATC TTCCTGCTCA ACCTGCCAGT CGGCCTGCTT GGCTGCATTG CCGTGTGGAA GTTCATCCCG GACTTGCGCG GCGCCGAGCG CACCACCTTC GACGGCCCTG GTTTCCTGCT GTTCGGCGCA GCCATGGTAC TGATCACCAT TGCCATGGAA GGCCTGGGCG AGCTGCACCT GCCGCACTTG CGGGTAATGT TGCTGCTGTT CGCCGGCATG GCCTGCCTGG CCGCGTACTG GCTGCGCGCC GGGCGCGACC CGGAGCCGCT GTTCTCGCCA AGCCTGTTCC GCGTGCGTAC TTTCGCCATC GGCATCCTCG GCAACCTGTT CGCCCGCCTG GGCAGCGGCG CGCTGCCGTT CCTGGTGCCA TTGCTGCTGC AGGTTGCGCT GGGCTACTCA CCCGCCCAGG CCGGCATGAG CATGATCCCG CTGGCGGCGG CGGCCATGCT GGCCAAATCC ATTGCCCGAC CGCTGATCGA ACGGTTCGGC TATCGCATCA TCCTCACCGG TAATACCTTG CTGTTGGGCA TCCTGCTGGC AAGCCTGGGC CTGGTGGACG AGCAGACCCC TTATTGGCTG CTGTTGGTGC AACTTGGCCT TCTGGGCGCA GTGAACTCCA TGCAGTTCAC TGCGATGAAC ACAGTGACGC TCATCGATCT CGACGACGCC AGCGCCAGCA GCGGTAACAG CCTGCTGTCG GTGGTCGCGC AACTGTCGCT GAGCCTGGGT GTGGCCTGCG CCGGCGCACT GTTGGGCGGC TTTACTGCGG CAGGCAGCGC CGAAGGCGTG GAAACCACCC TGGGCGCGTT CCAGCTGACC TTCGTCACCA TCGGTGTAAT GGCCATGCTG GCAGCAGCGA TCTTCCTGCA GCTGGCGCCG ACGGACGGAA GGCGTGCCCG TCGTCCGGAA CAACACATGG AGTCGTAG
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Protein sequence | MPERTPLDPV TARWIPWVVA IAFFMQSLDG TILNTALPAM ARSLAEDPLR MQGVIIAYML TVALLIPASG WIADRFGTKR IFFSAILLFS FGSLLCAAAN SLGFLIFARV VQGLGGALML PVGRLVVLRA YPRSELVRIM SFITIPGLLG PLLGPTVGGW LVEILSWHWI FLLNLPVGLL GCIAVWKFIP DLRGAERTTF DGPGFLLFGA AMVLITIAME GLGELHLPHL RVMLLLFAGM ACLAAYWLRA GRDPEPLFSP SLFRVRTFAI GILGNLFARL GSGALPFLVP LLLQVALGYS PAQAGMSMIP LAAAAMLAKS IARPLIERFG YRIILTGNTL LLGILLASLG LVDEQTPYWL LLVQLGLLGA VNSMQFTAMN TVTLIDLDDA SASSGNSLLS VVAQLSLSLG VACAGALLGG FTAAGSAEGV ETTLGAFQLT FVTIGVMAML AAAIFLQLAP TDGRRARRPE QHMES
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