Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4946 |
Symbol | putP |
ID | 1041925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5628632 |
End bp | 5630110 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637148347 |
Product | sodium/proline symporter |
Protein accession | NP_747049 |
Protein GI | 26991624 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAATC CACTAACGAT CACCTTCGTG ATCTACATCG CAGCAATGGT GCTGATCGGC TTCGCCGCCT ATCGCGCTAC CAACAACCTT TCCGATTACA TTCTGGGTGG TCGCAGCCTG GGTAGCGTGG TTACCGCGCT GTCTGCCGGT GCCTCCGACA TGAGTGGCTG GCTGCTGATG GGCCTGCCCG GTGCCATCTA CTTCGCGGGC CTGTCCGAGG CCTGGATCGC CATCGGCCTG ACAGTGGGTG CCTACCTGAA CTGGCTGTTC GTGGCAGGCC GGCTGCGCGT GCAGACCGAA CACAATGGTG ACGCGCTGAC CCTGCCGGAC TACTTCTCCA GCCGTTTCGA AGACAATAGC GGGCTGCTGC GTATCATTTC CGCCATCGTC ATCCTGGTGT TCTTCACCAT CTACTGTGCC TCCGGCATCG TGGCCGGTGC CCGTCTGTTC GAGAGCACCT TCGGCATGTC GTACGAAACC GCTTTGTGGG CTGGTGCGGC GGCGACCATC GCCTACACCT TCGTTGGTGG CTTCCTGGCG GTGAGCTGGA CCGATACCGT ACAGGCTTCG CTGATGATCT TCGCGCTGAT CCTGACCCCG GTAATCGTGC TGATCTCCAC CGGTGGCTTC GACCAGACCT TCGCCGCTAT CGAGGCGGTG AACCCGGCGA ACTTCGACAT GCTCAAGGGT GCCACCTTCA TCGGCATCAT CTCGCTGATG GGCTGGGGCC TGGGTTACTT CGGCCAGCCG CATATCCTGG CGCGCTTCAT GGCCGCTGAT TCGGTGAAGT CCATCGCCAA GGCGCGCCGC ATTTCCATGA CCTGGATGAT CCTGTGCCTG GCGGGTACCT GTGCCGTTGG CTTCTTCGGC ATTGCCTACT TCTCGGCCCA TCCTGAGCTG GCAGGCCCGG TTAGCGAGAA CCACGAACGT GTGTTCATCG AGCTGGCCAA GATCCTGTTC AACCCATGGG TTGCGGGTGT CCTGCTGTCG GCCATCCTGG CCGCAGTCAT GAGTACCCTG AGCTGCCAGC TGCTGGTGTG CTCCAGTGCC CTGACCGAAG ACTTCTACAA AGCCTTCCTG CGCAAGAATG CTTCGCAGGT CGAACTGGTG TGGGTCGGCC GTCTGATGGT GCTGGCCGTG GCCCTGATCG CCATCGCCAT GGCCGCCAAC CCGGAAAACC GCGTGCTGGG CCTGGTGGCC TATGCCTGGG CTGGCTTCGG TGCCGCCTTT GGCCCGGTGG TGCTGATTTC GGTGCTGTGG AAAGGCATGA CCCGTAACGG TGCGCTGGCC GGTATCGTGG TGGGTGCGCT GACGGTGATC CTGTGGAAGA ACTTCGACAC CCTCGGGTTG TACGAAATCA TCCCGGGCTT CCTGTTCGCC AGCATCGCCA TTGTTCTGGT GAGCAAGCTG GGCAGCCCTT CGCAGACGAT GGTCAAGCGC TTCGAAGCGG CTGATGCGGC GTATCACGCC GACAAGTAA
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Protein sequence | MGNPLTITFV IYIAAMVLIG FAAYRATNNL SDYILGGRSL GSVVTALSAG ASDMSGWLLM GLPGAIYFAG LSEAWIAIGL TVGAYLNWLF VAGRLRVQTE HNGDALTLPD YFSSRFEDNS GLLRIISAIV ILVFFTIYCA SGIVAGARLF ESTFGMSYET ALWAGAAATI AYTFVGGFLA VSWTDTVQAS LMIFALILTP VIVLISTGGF DQTFAAIEAV NPANFDMLKG ATFIGIISLM GWGLGYFGQP HILARFMAAD SVKSIAKARR ISMTWMILCL AGTCAVGFFG IAYFSAHPEL AGPVSENHER VFIELAKILF NPWVAGVLLS AILAAVMSTL SCQLLVCSSA LTEDFYKAFL RKNASQVELV WVGRLMVLAV ALIAIAMAAN PENRVLGLVA YAWAGFGAAF GPVVLISVLW KGMTRNGALA GIVVGALTVI LWKNFDTLGL YEIIPGFLFA SIAIVLVSKL GSPSQTMVKR FEAADAAYHA DK
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