| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4927 |
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| Symbol | |
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| ID | 1043832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5605938 |
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| End bp | 5608133 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637148328 |
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| Product | toxin secretion ABC transporter protein |
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| Protein accession | NP_747030 |
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| Protein GI | 26991605 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTCGGG CTAGTATCGC CTCATGTCCG GTTTTCATAA GAGGTGGCGT GATGGCTGAT
TTATCTGATG GCAATGCCAA CACTATTGAA AGTGGGCTGG TGTGTCTTAT CACGCTGGCG
CGTTACCATG GTGTTGCCGT CTCTGCCGAG CAGTTGCAGC ACGATCATGC AGCAGCGGGT
GAGCGTTTCT CCACCGGCCC ACTACTTCGG GCATTTCAGC AACTTGGCCT CAAGGCCAAA
CACCGCAGCG TCGATCCGGC CCGGCTGCAG CAGACGCCCT TGCCCGCTAT TGCAGTGGAT
ACGCGTGGTG AGTACTTCAT CATCGCGCGC GTGGAGGGCG AGCAGGTTCT GGTGCAGGAC
CCCCATTCCC GCGCGCCGCA AGCGCTGACC CTCGCGGAAC TGTTGGTGCG CTGGTCGGGA
GAACTCATTC TGGTTCGCTC CGATGCCCAG TTGCCCCTAG GGCTGTCGCG CTTCGACTTT
ACCTGGTTCA TTCCTGCTCT GGTGAAGTAC AGGCGGCTAT TTGGCGAAGT GCTCGTGGTT
TCCCTGGTCA TTCAGATACT GGCTTTGCTG ACGCCTTTGT TCTTTCAGGT GGTAATGGAC
AAAGTCCTGG TGCATCGCGG TTTGACCACG CTGGATGTTA TCGCCTTGGG TTTATTGGTC
GTCGTTCTGT TTGAAACATT GCTGAGTGGG TTGCGTACCT ATGTGGCAGC TCATACAGCG
TCAAGAATCG ATGTCGAACT GGGTGCAAAA CTGTTCAGGC ATTTGATCGA TCTTCCAACC
GCCTATTTTC ACGCCAGGCG AGTCGGTGAC TCGGTTGCCC GAGTGCGAGA ACTGGAGAAC
ATCAGAAGTT TCCTGACCAA CAACAGCATC ACGCTAGTGC TGGATGTGCT GTTCTCGGTG
GTCTTCATCG CTGTCATGTT CCTCTATAGC GGATGGTTGA CGCTGGTCGT CGTTGGCTCG
CTGCCTTTCT ATTTTCTCGT ATCCCTGGTC GTTACTCCGC TACTGCGGGC GTTGATTGAT
CAAAGCTTCC AACGCGGCGC CGAGAACCAG GCTTTCTTGG TCGAGGCGGT CAACGGCATC
GACACACTGA AGTCGATGGC CGTGGAACCT CAGGTGACCC GGCGCTGGAA TGATCAGTTG
GCCGCTTATG TATCTGCCAG TTTCAAGACC CAGAACCTTT CCAGTCTCGC CAATGAAAGC
GTCGGCCTGA TCGGCAAGCT TGTCACGGTA GCCACCTTGT GGCTGGGGGC CCGGCTGGTC
ATCGAAGGCG CACTCACGGT GGGCGAGCTG ATCGCCTTCA ACATGCTCGC AGGGCGCGTG
TCGCAGCCCA TCATCCGCCT GGCCCAACTC TGGACCAGCT TCCAGCAGAC AGGGGTATCG
ATTCAACGCC TGGGCGACAT TCTCAACACC CGTACCGAGG TCAACCAAGG CAAGGGCACG
GTGCTGCCCA CACTTGTCGG GCAGATCGAG CTCGATCGTG TGTGTTTTCG CTATCGGCCG
GACGGGGGCG AAGTGGTGCG CGATGTCAGC CTGAAGATCG CCGCCGGAGA AGTGATAGGC
GTTGTAGGTC GCTCGGGGTC AGGCAAGAGC ACGCTGACAC GCTTGATTCA GCGGCTGTAC
TCACCTGAGC GGGGGCGGGT ATTGCCCGAC GGTGCTGACC TGGCGGTAGC CGATGTGGCG
TCACTGCGTC GGCAGATCGG CGTGGTGTTG CAGGACAACG TGCTTTTTCG GCGCACCGTG
CGCGAGAACA TTGCCCTCGG CAACCCAGCA GCACCGCTTG AAGAAGTAAT CGCCGCAGCG
ACGCTGGCGG GTGCGCACGA GTTCATCCTC GAATTACCGG ATGGCTACGA AACCCTGATT
GGTGAGCACG GCGCCAGCCT GTCGGGTGGG CAGCGACAGC GCATAGCCAT CGCCCGAGCG
CTGTTCGGCA ACCCACGCAT CCTCATTTTC GACGAAGCCA CCAGTGCGCT GGACTATGAG
TCCGAACGGA TCATCCAGCA GAACATGGCG CGGATTTGCG CGCAGCGCAC GGTCATCATC
ATTGCCCATC GGCTTTCGGC AGTACGCCAT GCCGACCGCA TCGTGGTCAT GGAGCGTGGG
CAGATCATCG AGCAAGGGAC TCATGATGAG CTGCTGGGTT ATCCACAGGG CACCTATGCC
TACCTGCATC AACTGCAGCT CGGGGCCGCC GTATGA
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| Protein sequence | MLRASIASCP VFIRGGVMAD LSDGNANTIE SGLVCLITLA RYHGVAVSAE QLQHDHAAAG
ERFSTGPLLR AFQQLGLKAK HRSVDPARLQ QTPLPAIAVD TRGEYFIIAR VEGEQVLVQD
PHSRAPQALT LAELLVRWSG ELILVRSDAQ LPLGLSRFDF TWFIPALVKY RRLFGEVLVV
SLVIQILALL TPLFFQVVMD KVLVHRGLTT LDVIALGLLV VVLFETLLSG LRTYVAAHTA
SRIDVELGAK LFRHLIDLPT AYFHARRVGD SVARVRELEN IRSFLTNNSI TLVLDVLFSV
VFIAVMFLYS GWLTLVVVGS LPFYFLVSLV VTPLLRALID QSFQRGAENQ AFLVEAVNGI
DTLKSMAVEP QVTRRWNDQL AAYVSASFKT QNLSSLANES VGLIGKLVTV ATLWLGARLV
IEGALTVGEL IAFNMLAGRV SQPIIRLAQL WTSFQQTGVS IQRLGDILNT RTEVNQGKGT
VLPTLVGQIE LDRVCFRYRP DGGEVVRDVS LKIAAGEVIG VVGRSGSGKS TLTRLIQRLY
SPERGRVLPD GADLAVADVA SLRRQIGVVL QDNVLFRRTV RENIALGNPA APLEEVIAAA
TLAGAHEFIL ELPDGYETLI GEHGASLSGG QRQRIAIARA LFGNPRILIF DEATSALDYE
SERIIQQNMA RICAQRTVII IAHRLSAVRH ADRIVVMERG QIIEQGTHDE LLGYPQGTYA
YLHQLQLGAA V
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