Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4844 |
Symbol | |
ID | 1041853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5512362 |
End bp | 5513219 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148245 |
Product | branched-chain amino acid ABC transporter, ATP-binding protein, putative |
Protein accession | NP_746949 |
Protein GI | 26991524 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.21445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGGCG TGCCCCCAGT CCACCCGGAG TTCATGCTGG AACCGGTATT CGACAACCTC GGCGCCGGGC GCGATGCCAT CGGCCTGGGC CAAAGCCGCA AGGCCGGCCT GGATACCCGC CACGGTACGG TGCTGAGCCT GGAAGACATC AGCGTCAGCT TCGATGGTTT CAAGGCGCTC AACACGCTGA ACCTGTACAT CGGGGTGGGC GAGCTGCGCT GCATCATCGG CCCCAACGGC GCCGGCAAGA CCACGATGAT GGACGTAATC ACCGGCAAGA CCCGCCCCGA CAGCGGCACG GCTTACTTCG GCGACACCCT CGACCTGACC CGCATGAGCG AATACCAGAT CGCCCAGGCC GGCATTGGCC GCAAGTTCCA GAAGCCCACA GTGTTCGAAG CGCTGACCGT GTTCGAGAAC CTGGAGCTGG CGCTGAAGAC CGACAAGTCG GTGTGGGCCA GCCTGGCCGC GCGCCTGAGC GGTGACCAGC GCCAGCGCAT CGAGGACGTG CTGACCACCT TGCGCCTGCT GCCGCTGGCC CAGCGCCAGG CCGGCTTGCT GTCGCATGGG CAGAAGCAGT TTCTGGAGAT CGGCATGCTG CTGGTGCAGG AGCCGCAACT GCTGCTGCTC GATGAACCGG TGGCCGGCAT GACCGATGCC GAGACCGAAT TTACCGCCGA GCTGTTCAAG GGCCTGGCTG GCAAGCATTC GCTGATGGTG GTGGAGCATG ACATGGGCTT CGTCGGCAGC ATTGCCGACC ATGTGACCGT GCTGCACCAG GGGAGTGTGC TGGCGGAAGG CTCGCTGGAG CAGGTGCAGG CAGATGAGCG GGTGGTCGAG GTGTATCTGG GCCGCTGA
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Protein sequence | MRGVPPVHPE FMLEPVFDNL GAGRDAIGLG QSRKAGLDTR HGTVLSLEDI SVSFDGFKAL NTLNLYIGVG ELRCIIGPNG AGKTTMMDVI TGKTRPDSGT AYFGDTLDLT RMSEYQIAQA GIGRKFQKPT VFEALTVFEN LELALKTDKS VWASLAARLS GDQRQRIEDV LTTLRLLPLA QRQAGLLSHG QKQFLEIGML LVQEPQLLLL DEPVAGMTDA ETEFTAELFK GLAGKHSLMV VEHDMGFVGS IADHVTVLHQ GSVLAEGSLE QVQADERVVE VYLGR
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