Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4834 |
Symbol | |
ID | 1041846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5500532 |
End bp | 5501386 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148235 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | NP_746939 |
Protein GI | 26991514 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.220458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.54169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC TCATCGTCGT CGGCGCCATC GCCCTGTTCG TCCTGATCAC CGTGTTCAAG GGGGTGCGCA TCGTGCCCCA GGGCGAGGAG TGGATCGTCG AACGCCTGGG TCGCTACCAC AGCACCCTCA AGCCGGGCCT GAACATTGTC ATCCCCTACA TGGACGTGGT CGCCTACCGC CTGCCGACCA AGGACATCAT CCTCGATGTG CAGCAGCAGG AAATCATCAC CAAGGACAAC GCGGTAATCG TCGCCAACGC CCTGTGTTTC GCCAAGGTAG TCGACCCGCA GAAAGCCTCG TATGGTGTGC AGGACTTCTC GTTCGCCGTC ACCAGCCTGA CCATGACCTC GCTGCGCGCC ATCGTCGGTG CAATGGACCT CGACGAGGCG CTGTCCAGCC GCGAGCAGAT CAAGGCCCGC CTGCGCGATG CAATGTCCGA GCAGACCGAA GACTGGGGCG TGACCGTGCG CTCGGTGGAG ATTCAAGACA TCAAACCCTC GGAAAACATG CAACTGGCCA TGGAACGCCA GGCCGCGGCC GAACGTGAGC GCAAGGCCGA CGTTACCCGC GCCGAAGGGG CCAAGCAGGC GGCGATCCTC GAAGCAGAGG CTCGCCTGCA GGCGGCCAGG CTGGATGCCG AGGCACAGAT CAGCCTGGCC GAGGCCTCGG CGCGCTCGAT TTCGCTGGTG AAGGAAGCGG TGGGCAACGA GACCGTACCG GCCATGTACC TATTGGGCGA ACGCTATGTG GGCGCGATGG AGAACCTCGC GGGGAGCAGC AATGCCAAGG TGGTGGTGTT GCCGGCTGAC CTGCAAGAGA CCGTGCGCGG GTTGATGGGC CGCAACAAGA TTTGA
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Protein sequence | MTSLIVVGAI ALFVLITVFK GVRIVPQGEE WIVERLGRYH STLKPGLNIV IPYMDVVAYR LPTKDIILDV QQQEIITKDN AVIVANALCF AKVVDPQKAS YGVQDFSFAV TSLTMTSLRA IVGAMDLDEA LSSREQIKAR LRDAMSEQTE DWGVTVRSVE IQDIKPSENM QLAMERQAAA ERERKADVTR AEGAKQAAIL EAEARLQAAR LDAEAQISLA EASARSISLV KEAVGNETVP AMYLLGERYV GAMENLAGSS NAKVVVLPAD LQETVRGLMG RNKI
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